RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 LIMS1P48059 325 aa6.07□□□□□ -1.44
NUP43-206ENST00000543637 TPTEP56180 551 aa6.07□□□□□ -1.44
NUP43-206ENST00000543637 TSPAN31Q12999 210 aa6.07□□□□□ -1.44
NUP43-206ENST00000543637 SEC23BQ15437 767 aa6.07□□□□□ -1.44
NUP43-206ENST00000543637 TAF13Q15543 124 aa6.07□□□□□ -1.44
NUP43-206ENST00000543637 CCDC92Q53HC0 331 aaPredicted RBP6.07□□□□□ -1.44
NUP43-206ENST00000543637 C12orf54Q6X4T0 127 aa6.07□□□□□ -1.44
NUP43-206ENST00000543637 RBMS3Q6XE24 437 aaKnown RBP6.07□□□□□ -1.44
NUP43-206ENST00000543637 RFPL4BQ6ZWI9 263 aa6.07□□□□□ -1.44
NUP43-206ENST00000543637 TSEN54Q7Z6J9 526 aaKnown RBP6.07□□□□□ -1.44
NUP43-206ENST00000543637 DEFB107AQ8IZN7 70 aa6.07□□□□□ -1.44
NUP43-206ENST00000543637 C1orf87Q8N0U7 546 aa6.07□□□□□ -1.44
NUP43-206ENST00000543637 OR5AS1Q8N127 324 aa6.07□□□□□ -1.44
NUP43-206ENST00000543637 MUC20Q8N307 709 aaPredicted RBP6.07□□□□□ -1.44
NUP43-206ENST00000543637 SPICQ8N5J4 248 aa6.07□□□□□ -1.44
NUP43-206ENST00000543637 OR8G5Q8NG78 346 aa6.07□□□□□ -1.44
NUP43-206ENST00000543637 OR4K13Q8NH42 304 aa6.07□□□□□ -1.44
NUP43-206ENST00000543637 FANK1Q8TC84 345 aa6.07□□□□□ -1.44
NUP43-206ENST00000543637 GTF3AQ92664 365 aaKnown RBP6.07□□□□□ -1.44
NUP43-206ENST00000543637 NSL1Q96IY1 281 aa6.07□□□□□ -1.44
NUP43-206ENST00000543637 NMNAT3Q96T66 252 aa6.07□□□□□ -1.44
NUP43-206ENST00000543637 COQ7Q99807 217 aa6.07□□□□□ -1.44
NUP43-206ENST00000543637 SUCNR1Q9BXA5 334 aa6.07□□□□□ -1.44
NUP43-206ENST00000543637 IL1RAPQ9NPH3 570 aa6.07□□□□□ -1.44
NUP43-206ENST00000543637 RPRD1BQ9NQG5 326 aaKnown RBP6.07□□□□□ -1.44
NUP43-206ENST00000543637 TMEM106BQ9NUM4 274 aa6.07□□□□□ -1.44
NUP43-206ENST00000543637 TMEM100Q9NV29 134 aa6.07□□□□□ -1.44
NUP43-206ENST00000543637 CD300AQ9UGN4 299 aa6.07□□□□□ -1.44
NUP43-206ENST00000543637 NOP16Q9Y3C1 178 aaKnown RBP6.07□□□□□ -1.44
NUP43-206ENST00000543637 CACNG2Q9Y698 323 aa6.07□□□□□ -1.44
NUP43-206ENST00000543637 NF1P21359 2839 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 LRRC30A6NM36 301 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 B2RBV5 119 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 F5H5K5 113 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 TNFRSF11BO00300 401 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 ARPC2O15144 300 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 RER1O15258 196 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 CCNB2O95067 398 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 LCATP04180 440 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 HIST1H1CP16403 213 aaKnown RBP6.06□□□□□ -1.44
NUP43-206ENST00000543637 ZNF26P17031 533 aaPredicted RBP6.06□□□□□ -1.44
NUP43-206ENST00000543637 CPT2P23786 658 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 FPR3P25089 353 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 HIST1H3AP68431 136 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 LCN2P80188 198 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 SRSF2Q01130 221 aaKnown RBP6.06□□□□□ -1.44
NUP43-206ENST00000543637 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.06□□□□□ -1.44
NUP43-206ENST00000543637 MEP1BQ16820 701 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 FAM98BQ52LJ0 330 aaKnown RBP6.06□□□□□ -1.44
NUP43-206ENST00000543637 ESCO2Q56NI9 601 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 SLC35F1Q5T1Q4 408 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 HIST2H3PS2Q5TEC6 136 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 OR2T2Q6IF00 324 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 FBXW12Q6X9E4 464 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 PTCHD4Q6ZW05 846 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 HIST2H3AQ71DI3 136 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 ZNF771Q7L3S4 317 aaPredicted RBP6.06□□□□□ -1.44
NUP43-206ENST00000543637 PIGWQ7Z7B1 504 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 LRRC28Q86X40 367 aaPredicted RBP6.06□□□□□ -1.44
NUP43-206ENST00000543637 DHFR2Q86XF0 187 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 OR6V1Q8N148 313 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 ARHGAP24Q8N264 748 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 BPIFB2Q8N4F0 458 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 FAM86B1Q8N7N1 296 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 OR52E2Q8NGJ4 325 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 ZFAND2BQ8WV99 257 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 ITLN1Q8WWA0 313 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 SLC7A6Q92536 515 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 SPTSSAQ969W0 71 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 PLEKHA8Q96JA3 519 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 DHRS1Q96LJ7 313 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 LRGUKQ96M69 825 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 TSSK2Q96PF2 358 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 OR2V2Q96R30 315 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 GPA33Q99795 319 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 ATF6BQ99941 703 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 MRI1Q9BV20 369 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 NTN4Q9HB63 628 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 PATZ1Q9HBE1 687 aaKnown RBP6.06□□□□□ -1.44
NUP43-206ENST00000543637 ARL8BQ9NVJ2 186 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 ACTR3BQ9P1U1 418 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 MIOXQ9UGB7 285 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 KCNG2Q9UJ96 466 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 BAIAP2Q9UQB8 552 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 VPS13CQ709C8 3753 aa6.06□□□□□ -1.44
NUP43-206ENST00000543637 PPIAL4EA0A075B759 164 aa6.05□□□□□ -1.44
NUP43-206ENST00000543637 PPIAL4CA0A0B4J2A2 164 aa6.05□□□□□ -1.44
NUP43-206ENST00000543637 IQCF6A8MYZ5 107 aa6.05□□□□□ -1.44
NUP43-206ENST00000543637 PPIAL4DF5H284 164 aa6.05□□□□□ -1.44
NUP43-206ENST00000543637 GNGT2O14610 69 aa6.05□□□□□ -1.44
NUP43-206ENST00000543637 DEAF1O75398 565 aaPredicted RBP6.05□□□□□ -1.44
NUP43-206ENST00000543637 GPANK1O95872 356 aa6.05□□□□□ -1.44
NUP43-206ENST00000543637 DBHP09172 617 aa6.05□□□□□ -1.44
NUP43-206ENST00000543637 PPIAL4FP0DN26 164 aa6.05□□□□□ -1.44
NUP43-206ENST00000543637 EPHA1P21709 976 aa6.05□□□□□ -1.44
NUP43-206ENST00000543637 FMO3P31513 532 aa6.05□□□□□ -1.44
NUP43-206ENST00000543637 GGT2P36268 569 aa6.05□□□□□ -1.44
NUP43-206ENST00000543637 MDH2P40926 338 aaKnown RBP6.05□□□□□ -1.44
NUP43-206ENST00000543637 SLC6A9P48067 706 aa6.05□□□□□ -1.44
NUP43-206ENST00000543637 GSSP48637 474 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms