RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 EMX1Q04741 257 aaPredicted RBP6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 PLA2G7Q13093 441 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 AADACL3Q5VUY0 350 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 FJX1Q86VR8 437 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF547Q8IVP9 402 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 MTURNQ8N3F0 131 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 DEFB108BQ8NET1 73 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 DMBX1Q8NFW5 382 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 MSI2Q96DH6 328 aaKnown RBP6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF799Q96GE5 643 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF419Q96HQ0 510 aaPredicted RBP6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 ARL6Q9H0F7 186 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 TCFL5Q9UL49 500 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 PCDHGA9Q9Y5G4 932 aaKnown RBP6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 SHANK3Q9BYB0 1731 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 A0A1W2PQF6 199 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 ANKUB1A6NFN9 424 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 GAPDHSO14556 408 aaPredicted RBP6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 P2RX6O15547 441 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 ATP1B1P05026 303 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 PRR35P0CG20 571 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 ERP29P30040 261 aaKnown RBP6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 TAS2R19P59542 299 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 KCNJ8Q15842 424 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 ANKRD16Q6P6B7 361 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 DOK3Q7L591 496 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 ANKRD37Q7Z713 158 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 CD163Q86VB7 1156 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 FAM185AQ8N0U4 392 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 NKAIN3Q8N8D7 197 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 KDF1Q8NAX2 398 aaPredicted RBP6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 NHLRC2Q8NBF2 726 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 OR52N5Q8NH56 324 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 ARSGQ96EG1 525 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF681Q96N22 645 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 CNTD2Q9H8S5 307 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 GALNT9Q9HCQ5 603 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 ADAMTSL1Q8N6G6 1762 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 ATP6V1G2-DDX39BF2Z307 99 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 NUPL2O15504 423 aaKnown RBP6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 DHHO43323 396 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 LYRM1O43325 122 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 SELENOFO60613 162 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 SLC22A5O76082 557 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 PTAFRP25105 342 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 GABRA5P31644 462 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 FABP6P51161 128 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 STK35Q8TDR2 534 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 UTP4Q969X6 686 aaKnown RBP6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 NKX3-1Q99801 234 aaPredicted RBP6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 NRIP3Q9NQ35 241 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 OCIAD1Q9NX40 245 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF346Q9UL40 294 aaKnown RBP6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 RP1P56715 2156 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 CLDN24A6NM45 220 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 TSTD3H0UI37 97 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 EFSO43281 561 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 BCAS1O75363 584 aaPredicted RBP6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 LAP3P28838 519 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 S100A7P31151 101 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 DEFA5Q01523 94 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 FGFBP1Q14512 234 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 ADIPOQQ15848 244 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 AGAP6Q5VW22 663 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 FBXW12Q6X9E4 464 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 LRRC28Q86X40 367 aaPredicted RBP6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 OR10G3Q8NGC4 313 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 UPRTQ96BW1 309 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 WFIKKN1Q96NZ8 548 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 GNRHR2Q96P88 292 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 ALKBH3Q96Q83 286 aaPredicted RBP6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 GAL3ST2Q9H3Q3 398 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 HRASLSQ9HDD0 168 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 PRELID3BQ9Y3B1 194 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 A0A1B0GV72 72 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 GATCO43716 136 aaKnown RBP6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 SC5DO75845 299 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 UBBP0CG47 229 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 B4GALT1P15291 398 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 PPP1CAP62136 330 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF616Q08AN1 781 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 YIF1BQ5BJH7 314 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 LCN10Q6JVE6 187 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 Q6ZTK2 550 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 SLAMF6Q96DU3 332 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 FBXO17Q96EF6 278 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 LRRC3BQ96PB8 259 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 PPA2Q9H2U2 334 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 ACER3Q9NUN7 267 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 DIMT1Q9UNQ2 313 aaKnown RBP6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 CACNA1EQ15878 2313 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 ANKRD31Q8N7Z5 1873 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 A0A0G2JMP0 313 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 PAPLNO95428 1278 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 RBP2P50120 134 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 PRSS12P56730 875 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 UBE2G2P60604 165 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 B2MP61769 119 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 RPL23AP62750 156 aaKnown RBP6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 GNB2P62879 340 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms