RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 UBE2FQ969M7 185 aa14.81□□□□□ -0.04
CLSTN3-214ENST00000542663 COG8Q96MW5 612 aa14.81□□□□□ -0.04
CLSTN3-214ENST00000542663 CLN8Q9UBY8 286 aa14.81□□□□□ -0.04
CLSTN3-214ENST00000542663 ZNF281Q9Y2X9 895 aa14.81□□□□□ -0.04
CLSTN3-214ENST00000542663 POMT1Q9Y6A1 747 aa14.81□□□□□ -0.04
CLSTN3-214ENST00000542663 PLXNB1O43157 2135 aa14.81□□□□□ -0.04
CLSTN3-214ENST00000542663 OR6C6A6NF89 314 aa14.8□□□□□ -0.04
CLSTN3-214ENST00000542663 A6NIZ1 184 aa14.8□□□□□ -0.04
CLSTN3-214ENST00000542663 F5H5P2 479 aa14.8□□□□□ -0.04
CLSTN3-214ENST00000542663 FBP2O00757 339 aa14.8□□□□□ -0.04
CLSTN3-214ENST00000542663 PHYHO14832 338 aa14.8□□□□□ -0.04
CLSTN3-214ENST00000542663 TNFRSF13BO14836 293 aaPredicted RBP14.8□□□□□ -0.04
CLSTN3-214ENST00000542663 ANGPT2O15123 496 aa14.8□□□□□ -0.04
CLSTN3-214ENST00000542663 CLPXO76031 633 aa14.8□□□□□ -0.04
CLSTN3-214ENST00000542663 DBHP09172 617 aa14.8□□□□□ -0.04
CLSTN3-214ENST00000542663 SRP9P49458 86 aaKnown RBP14.8□□□□□ -0.04
CLSTN3-214ENST00000542663 PROK1P58294 105 aa14.8□□□□□ -0.04
CLSTN3-214ENST00000542663 RAP1BP61224 184 aa14.8□□□□□ -0.04
CLSTN3-214ENST00000542663 RAP1AP62834 184 aa14.8□□□□□ -0.04
CLSTN3-214ENST00000542663 NFYCQ13952 458 aa14.8□□□□□ -0.04
CLSTN3-214ENST00000542663 NLRC3Q7RTR2 1065 aa14.8□□□□□ -0.04
CLSTN3-214ENST00000542663 PCYOX1LQ8NBM8 494 aa14.8□□□□□ -0.04
CLSTN3-214ENST00000542663 OR51A7Q8NH64 312 aa14.8□□□□□ -0.04
CLSTN3-214ENST00000542663 FAM71F1Q96KD3 344 aaPredicted RBP14.8□□□□□ -0.04
CLSTN3-214ENST00000542663 MAGEB18Q96M61 343 aa14.8□□□□□ -0.04
CLSTN3-214ENST00000542663 SLC30A2Q9BRI3 323 aa14.8□□□□□ -0.04
CLSTN3-214ENST00000542663 PTTG3PQ9NZH4 202 aa14.8□□□□□ -0.04
CLSTN3-214ENST00000542663 BAG5Q9UL15 447 aa14.8□□□□□ -0.04
CLSTN3-214ENST00000542663 CENPVL3A0A0U1RRI6 287 aa14.79□□□□□ -0.04
CLSTN3-214ENST00000542663 A0A1B0GWJ7 208 aa14.79□□□□□ -0.04
CLSTN3-214ENST00000542663 SLC22A31A6NKX4 558 aa14.79□□□□□ -0.04
CLSTN3-214ENST00000542663 MMP9P14780 707 aa14.79□□□□□ -0.04
CLSTN3-214ENST00000542663 RPL15P61313 204 aaKnown RBP14.79□□□□□ -0.04
CLSTN3-214ENST00000542663 PDCD1Q15116 288 aa14.79□□□□□ -0.04
CLSTN3-214ENST00000542663 CCDC92Q53HC0 331 aaPredicted RBP14.79□□□□□ -0.04
CLSTN3-214ENST00000542663 ZNF620Q6ZNG0 422 aa14.79□□□□□ -0.04
CLSTN3-214ENST00000542663 DCDC5Q6ZRR9 648 aa14.79□□□□□ -0.04
CLSTN3-214ENST00000542663 CALHM3Q86XJ0 350 aa14.79□□□□□ -0.04
CLSTN3-214ENST00000542663 C19orf18Q8NEA5 215 aa14.79□□□□□ -0.04
CLSTN3-214ENST00000542663 DYRK2Q92630 601 aa14.79□□□□□ -0.04
CLSTN3-214ENST00000542663 TBX15Q96SF7 602 aa14.79□□□□□ -0.04
CLSTN3-214ENST00000542663 PCGF1Q9BSM1 259 aa14.79□□□□□ -0.04
CLSTN3-214ENST00000542663 RABEP2Q9H5N1 569 aa14.79□□□□□ -0.04
CLSTN3-214ENST00000542663 TMBIM4Q9HC24 238 aa14.79□□□□□ -0.04
CLSTN3-214ENST00000542663 A4GNTQ9UNA3 340 aa14.79□□□□□ -0.04
CLSTN3-214ENST00000542663 ADAM18Q9Y3Q7 739 aa14.79□□□□□ -0.04
CLSTN3-214ENST00000542663 J3QW42 95 aa14.78□□□□□ -0.04
CLSTN3-214ENST00000542663 GPR137BO60478 399 aa14.78□□□□□ -0.04
CLSTN3-214ENST00000542663 CTLA4P16410 223 aa14.78□□□□□ -0.04
CLSTN3-214ENST00000542663 CFHR2P36980 270 aa14.78□□□□□ -0.04
CLSTN3-214ENST00000542663 PSMB10P40306 273 aa14.78□□□□□ -0.04
CLSTN3-214ENST00000542663 HOXA4Q00056 320 aaPredicted RBP14.78□□□□□ -0.04
CLSTN3-214ENST00000542663 AQP6Q13520 282 aa14.78□□□□□ -0.04
CLSTN3-214ENST00000542663 MESTQ5EB52 335 aa14.78□□□□□ -0.04
CLSTN3-214ENST00000542663 NANOGP8Q6NSW7 305 aa14.78□□□□□ -0.04
CLSTN3-214ENST00000542663 BHLHE23Q8NDY6 225 aa14.78□□□□□ -0.04
CLSTN3-214ENST00000542663 OR1F12Q8NHA8 337 aa14.78□□□□□ -0.04
CLSTN3-214ENST00000542663 SSMEM1Q8WWF3 244 aa14.78□□□□□ -0.04
CLSTN3-214ENST00000542663 ZNF582Q96NG8 517 aaPredicted RBP14.78□□□□□ -0.04
CLSTN3-214ENST00000542663 ASH2LQ9UBL3 628 aa14.78□□□□□ -0.04
CLSTN3-214ENST00000542663 TEX13CA0A0J9YWL9 993 aa14.77□□□□□ -0.05
CLSTN3-214ENST00000542663 LRRC30A6NM36 301 aa14.77□□□□□ -0.05
CLSTN3-214ENST00000542663 IQCF6A8MYZ5 107 aa14.77□□□□□ -0.05
CLSTN3-214ENST00000542663 ENSAO43768 121 aaKnown RBP14.77□□□□□ -0.05
CLSTN3-214ENST00000542663 HLA-DPB1P04440 258 aa14.77□□□□□ -0.05
CLSTN3-214ENST00000542663 ZNF26P17031 533 aaPredicted RBP14.77□□□□□ -0.05
CLSTN3-214ENST00000542663 GATA4P43694 442 aa14.77□□□□□ -0.05
CLSTN3-214ENST00000542663 ST3GAL3Q11203 375 aa14.77□□□□□ -0.05
CLSTN3-214ENST00000542663 TTMPQ5BVD1 217 aa14.77□□□□□ -0.05
CLSTN3-214ENST00000542663 RABL3Q5HYI8 236 aa14.77□□□□□ -0.05
CLSTN3-214ENST00000542663 NRMQ8IXM6 262 aa14.77□□□□□ -0.05
CLSTN3-214ENST00000542663 C1orf87Q8N0U7 546 aa14.77□□□□□ -0.05
CLSTN3-214ENST00000542663 OR13C2Q8NGS9 318 aa14.77□□□□□ -0.05
CLSTN3-214ENST00000542663 RASD2Q96D21 266 aa14.77□□□□□ -0.05
CLSTN3-214ENST00000542663 Q96M85 177 aa14.77□□□□□ -0.05
CLSTN3-214ENST00000542663 CTSZQ9UBR2 303 aa14.77□□□□□ -0.05
CLSTN3-214ENST00000542663 HTR3EA5X5Y0 456 aa14.76□□□□□ -0.05
CLSTN3-214ENST00000542663 ZNF879B4DU55 563 aa14.76□□□□□ -0.05
CLSTN3-214ENST00000542663 P2RY10O00398 339 aa14.76□□□□□ -0.05
CLSTN3-214ENST00000542663 RER1O15258 196 aa14.76□□□□□ -0.05
CLSTN3-214ENST00000542663 TOX4O94842 621 aa14.76□□□□□ -0.05
CLSTN3-214ENST00000542663 IGHV4-59P01825 116 aa14.76□□□□□ -0.05
CLSTN3-214ENST00000542663 RGS6P49758 472 aa14.76□□□□□ -0.05
CLSTN3-214ENST00000542663 PRSS12P56730 875 aa14.76□□□□□ -0.05
CLSTN3-214ENST00000542663 PRKCDQ05655 676 aa14.76□□□□□ -0.05
CLSTN3-214ENST00000542663 MAB21L1Q13394 359 aa14.76□□□□□ -0.05
CLSTN3-214ENST00000542663 ANKDD1AQ495B1 522 aa14.76□□□□□ -0.05
CLSTN3-214ENST00000542663 FBLN7Q53RD9 439 aa14.76□□□□□ -0.05
CLSTN3-214ENST00000542663 CLEC12AQ5QGZ9 265 aa14.76□□□□□ -0.05
CLSTN3-214ENST00000542663 FAM122BQ7Z309 247 aa14.76□□□□□ -0.05
CLSTN3-214ENST00000542663 OAFQ86UD1 273 aa14.76□□□□□ -0.05
CLSTN3-214ENST00000542663 Q8TCH9 128 aa14.76□□□□□ -0.05
CLSTN3-214ENST00000542663 TSPEARQ8WU66 669 aa14.76□□□□□ -0.05
CLSTN3-214ENST00000542663 PRRC1Q96M27 445 aa14.76□□□□□ -0.05
CLSTN3-214ENST00000542663 WDR76Q9H967 626 aa14.76□□□□□ -0.05
CLSTN3-214ENST00000542663 TCF7L1Q9HCS4 588 aa14.76□□□□□ -0.05
CLSTN3-214ENST00000542663 ACOXLQ9NUZ1 547 aa14.76□□□□□ -0.05
CLSTN3-214ENST00000542663 ATPIF1Q9UII2 106 aa14.76□□□□□ -0.05
CLSTN3-214ENST00000542663 TMCC3Q9ULS5 477 aa14.76□□□□□ -0.05
CLSTN3-214ENST00000542663 PRSS37A4D1T9 235 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms