RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 ACTG2P63267 376 aa20.06■□□□□ 0.8
HOMER3-205ENST00000542541 ZNF85Q03923 595 aa20.06■□□□□ 0.8
HOMER3-205ENST00000542541 GALEQ14376 348 aa20.06■□□□□ 0.8
HOMER3-205ENST00000542541 KCTD20Q7Z5Y7 419 aa20.06■□□□□ 0.8
HOMER3-205ENST00000542541 LHFPL3Q86UP9 236 aa20.06■□□□□ 0.8
HOMER3-205ENST00000542541 OR8B4Q96RC9 309 aa20.06■□□□□ 0.8
HOMER3-205ENST00000542541 KCNS3Q9BQ31 491 aa20.06■□□□□ 0.8
HOMER3-205ENST00000542541 SULT1C4O75897 302 aa20.05■□□□□ 0.8
HOMER3-205ENST00000542541 CRYAAP02489 173 aa20.05■□□□□ 0.8
HOMER3-205ENST00000542541 APOC1P02654 83 aa20.05■□□□□ 0.8
HOMER3-205ENST00000542541 CELA3BP08861 270 aa20.05■□□□□ 0.8
HOMER3-205ENST00000542541 HSD11B1P28845 292 aa20.05■□□□□ 0.8
HOMER3-205ENST00000542541 CHN2P52757 468 aa20.05■□□□□ 0.8
HOMER3-205ENST00000542541 GABARAPL2P60520 117 aa20.05■□□□□ 0.8
HOMER3-205ENST00000542541 BEX5Q5H9J7 111 aa20.05■□□□□ 0.8
HOMER3-205ENST00000542541 POM121L2Q96KW2 1035 aa20.05■□□□□ 0.8
HOMER3-205ENST00000542541 DCLRE1CQ96SD1 692 aaKnown RBP20.05■□□□□ 0.8
HOMER3-205ENST00000542541 KCNJ15Q99712 375 aa20.05■□□□□ 0.8
HOMER3-205ENST00000542541 SLCO1C1Q9NYB5 712 aa20.05■□□□□ 0.8
HOMER3-205ENST00000542541 RGS10O43665 173 aa20.05■□□□□ 0.8
HOMER3-205ENST00000542541 TACSTD2P09758 323 aa20.05■□□□□ 0.8
HOMER3-205ENST00000542541 CD40P25942 277 aa20.05■□□□□ 0.8
HOMER3-205ENST00000542541 NR1H2P55055 460 aa20.05■□□□□ 0.8
HOMER3-205ENST00000542541 GALK2Q01415 458 aa20.05■□□□□ 0.8
HOMER3-205ENST00000542541 ARL9Q6T311 187 aa20.05■□□□□ 0.8
HOMER3-205ENST00000542541 LRRN1Q6UXK5 716 aa20.05■□□□□ 0.8
HOMER3-205ENST00000542541 RFLNBQ8N5W9 214 aa20.05■□□□□ 0.8
HOMER3-205ENST00000542541 ALG8Q9BVK2 526 aa20.05■□□□□ 0.8
HOMER3-205ENST00000542541 CDH20Q9HBT6 801 aa20.05■□□□□ 0.8
HOMER3-205ENST00000542541 PAK1IP1Q9NWT1 392 aaPredicted RBP20.05■□□□□ 0.8
HOMER3-205ENST00000542541 UTP20O75691 2785 aaKnown RBP20.04■□□□□ 0.8
HOMER3-205ENST00000542541 LOC100509620A0A075B734 347 aa20.04■□□□□ 0.8
HOMER3-205ENST00000542541 C5orf49A4QMS7 147 aa20.04■□□□□ 0.8
HOMER3-205ENST00000542541 METTL15A6NJ78 407 aa20.04■□□□□ 0.8
HOMER3-205ENST00000542541 F5H5K5 113 aa20.04■□□□□ 0.8
HOMER3-205ENST00000542541 MRPS14O60783 128 aaKnown RBP20.04■□□□□ 0.8
HOMER3-205ENST00000542541 CCNOP22674 350 aa20.04■□□□□ 0.8
HOMER3-205ENST00000542541 C21orf33P30042 268 aaPredicted RBP20.04■□□□□ 0.8
HOMER3-205ENST00000542541 RIDAP52758 137 aaKnown RBP20.04■□□□□ 0.8
HOMER3-205ENST00000542541 TPTEP56180 551 aa20.04■□□□□ 0.8
HOMER3-205ENST00000542541 NAAAQ02083 359 aa20.04■□□□□ 0.8
HOMER3-205ENST00000542541 RNLSQ5VYX0 342 aa20.04■□□□□ 0.8
HOMER3-205ENST00000542541 SP5Q6BEB4 398 aaPredicted RBP20.04■□□□□ 0.8
HOMER3-205ENST00000542541 TMPRSS11AQ6ZMR5 421 aa20.04■□□□□ 0.8
HOMER3-205ENST00000542541 SSX6Q7RTT6 188 aa20.04■□□□□ 0.8
HOMER3-205ENST00000542541 FAM220AQ7Z4H9 259 aa20.04■□□□□ 0.8
HOMER3-205ENST00000542541 CDCA4Q9BXL8 241 aa20.04■□□□□ 0.8
HOMER3-205ENST00000542541 TTTY10Q9BZA0 68 aa20.04■□□□□ 0.8
HOMER3-205ENST00000542541 ELOVL3Q9HB03 270 aa20.04■□□□□ 0.8
HOMER3-205ENST00000542541 ERVK-18Q9QC07 812 aa20.04■□□□□ 0.8
HOMER3-205ENST00000542541 KCNN3Q9UGI6 736 aa20.04■□□□□ 0.8
HOMER3-205ENST00000542541 ERGIC3Q9Y282 383 aa20.04■□□□□ 0.8
HOMER3-205ENST00000542541 ANKHD1Q8IWZ3 2542 aaKnown RBP20.04■□□□□ 0.8
HOMER3-205ENST00000542541 TNFAIP8O95379 198 aa20.03■□□□□ 0.8
HOMER3-205ENST00000542541 LIMS3P0CW19 117 aa20.03■□□□□ 0.8
HOMER3-205ENST00000542541 LIMS4P0CW20 117 aa20.03■□□□□ 0.8
HOMER3-205ENST00000542541 DCTDP32321 178 aa20.03■□□□□ 0.8
HOMER3-205ENST00000542541 MVKQ03426 396 aa20.03■□□□□ 0.8
HOMER3-205ENST00000542541 KCTD21Q4G0X4 260 aa20.03■□□□□ 0.8
HOMER3-205ENST00000542541 CDONQ4KMG0 1287 aa20.03■□□□□ 0.8
HOMER3-205ENST00000542541 NCMAPQ5T1S8 102 aa20.03■□□□□ 0.8
HOMER3-205ENST00000542541 PRSS48Q7RTY5 328 aa20.03■□□□□ 0.8
HOMER3-205ENST00000542541 MYPOPQ86VE0 399 aaPredicted RBP20.03■□□□□ 0.8
HOMER3-205ENST00000542541 SYS1Q8N2H4 156 aa20.03■□□□□ 0.8
HOMER3-205ENST00000542541 YIPF7Q8N8F6 280 aa20.03■□□□□ 0.8
HOMER3-205ENST00000542541 NR1H4Q96RI1 486 aaPredicted RBP20.03■□□□□ 0.8
HOMER3-205ENST00000542541 CCDC90BQ9GZT6 254 aa20.03■□□□□ 0.8
HOMER3-205ENST00000542541 EIF3KQ9UBQ5 218 aaKnown RBP20.03■□□□□ 0.8
HOMER3-205ENST00000542541 LRP12Q9Y561 859 aa20.03■□□□□ 0.8
HOMER3-205ENST00000542541 DPRXA6NFQ7 191 aa20.02■□□□□ 0.8
HOMER3-205ENST00000542541 PSMD9O00233 223 aa20.02■□□□□ 0.8
HOMER3-205ENST00000542541 CCL2P13500 99 aa20.02■□□□□ 0.8
HOMER3-205ENST00000542541 OTX1P32242 354 aaPredicted RBP20.02■□□□□ 0.8
HOMER3-205ENST00000542541 ETV1P50549 477 aa20.02■□□□□ 0.8
HOMER3-205ENST00000542541 BSPH1Q075Z2 132 aa20.02■□□□□ 0.8
HOMER3-205ENST00000542541 DAZAP2Q15038 168 aaPredicted RBP20.02■□□□□ 0.8
HOMER3-205ENST00000542541 KRTAP27-1Q3LI81 207 aa20.02■□□□□ 0.8
HOMER3-205ENST00000542541 ZNF684Q5T5D7 378 aa20.02■□□□□ 0.8
HOMER3-205ENST00000542541 UNQ6126/PRO20091Q6UXV3 157 aa20.02■□□□□ 0.8
HOMER3-205ENST00000542541 SLC7A6Q92536 515 aa20.02■□□□□ 0.8
HOMER3-205ENST00000542541 PLPPR2Q96GM1 343 aa20.02■□□□□ 0.8
HOMER3-205ENST00000542541 RADILQ96JH8 1075 aa20.02■□□□□ 0.8
HOMER3-205ENST00000542541 ZNF649Q9BS31 505 aa20.02■□□□□ 0.8
HOMER3-205ENST00000542541 MRM2Q9UI43 246 aaKnown RBP20.02■□□□□ 0.8
HOMER3-205ENST00000542541 CAB39Q9Y376 341 aaPredicted RBP20.02■□□□□ 0.8
HOMER3-205ENST00000542541 SPEF1Q9Y4P9 236 aa20.02■□□□□ 0.8
HOMER3-205ENST00000542541 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.02■□□□□ 0.79
HOMER3-205ENST00000542541 PRR32B1ATL7 298 aa20.02■□□□□ 0.79
HOMER3-205ENST00000542541 M0R135 149 aa20.02■□□□□ 0.79
HOMER3-205ENST00000542541 GOSR1O95249 250 aa20.02■□□□□ 0.79
HOMER3-205ENST00000542541 ZNF35P13682 527 aa20.02■□□□□ 0.79
HOMER3-205ENST00000542541 PRKXP51817 358 aa20.02■□□□□ 0.79
HOMER3-205ENST00000542541 RSPO1Q2MKA7 263 aaPredicted RBP20.02■□□□□ 0.79
HOMER3-205ENST00000542541 DRAM2Q6UX65 266 aa20.02■□□□□ 0.79
HOMER3-205ENST00000542541 KLHL36Q8N4N3 616 aa20.02■□□□□ 0.79
HOMER3-205ENST00000542541 ZNF283Q8N7M2 679 aa20.02■□□□□ 0.79
HOMER3-205ENST00000542541 ZNF799Q96GE5 643 aa20.02■□□□□ 0.79
HOMER3-205ENST00000542541 PSMG3-AS1Q96PY0 264 aa20.02■□□□□ 0.79
HOMER3-205ENST00000542541 SP140LQ9H930 580 aa20.02■□□□□ 0.79
HOMER3-205ENST00000542541 GNG8Q9UK08 70 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms