RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 TRMT12Q53H54 448 aaKnown RBP7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 DCAF10Q5QP82 559 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 ABLIM2Q6H8Q1 611 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 CDPF1Q6NVV7 123 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 SSX6Q7RTT6 188 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 NAXDQ8IW45 347 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 SLC16A11Q8NCK7 471 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 BEND2Q8NDZ0 799 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 OR4K5Q8NGD3 323 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 PAQR8Q8TEZ7 354 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 RSRP1Q9BUV0 290 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 FNDC11Q9BVV2 318 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 ENKD1Q9H0I2 346 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 ADAP2Q9NPF8 381 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 ISYNA1Q9NPH2 558 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 MAN2C1Q9NTJ4 1040 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 NDOR1Q9UHB4 597 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 ZDHHC8Q9ULC8 765 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 CBLCQ9ULV8 474 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 SIRT4Q9Y6E7 314 aaPredicted RBP7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 TDRD6O60522 2096 aaKnown RBP7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 IRGMA1A4Y4 181 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 H3BMH7 237 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 TGFBR3LH3BV60 316 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 GOSR2O14653 212 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 FLRT2O43155 660 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 GPR75O95800 540 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 RLN1P04808 185 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 CT62P0C5K7 136 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 TBXA2RP21731 343 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 NAA10P41227 235 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 CEBPDP49716 269 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 PDX1P52945 283 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 GFERP55789 205 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 SORDQ00796 357 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 KLF9Q13886 244 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 HYAL4Q2M3T9 481 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 PRICKLE4Q2TBC4 344 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 SMARCD3Q6STE5 483 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 FRRS1Q6ZNA5 592 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 DGAT2L6Q6ZPD8 337 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 FOXRED2Q8IWF2 684 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 STXBP6Q8NFX7 210 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 OR9A4Q8NGU2 314 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 CPT1CQ8TCG5 803 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 HOXB13Q92826 284 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 CTHRC1Q96CG8 243 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 ZG16BQ96DA0 208 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 TCTN2Q96GX1 697 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 TEAD3Q99594 435 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 ARHGDIGQ99819 225 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 NDUFAF3Q9BU61 184 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 CHRNA10Q9GZZ6 450 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 RAB33BQ9H082 229 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 PRO1933Q9H354 126 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 HRASLSQ9HDD0 168 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 TMEM140Q9NV12 185 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 IL17BQ9UHF5 180 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 TNRC6BQ9UPQ9 1833 aaKnown RBP7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 MYO15AQ9UKN7 3530 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 A0A087WV62 115 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 IGHV5-51A0A0C4DH38 117 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 FAM183AA6NL82 134 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 SYT5O00445 386 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 PPIHO43447 177 aaKnown RBP7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 PRAF2O60831 178 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 NBEAP1P0C6P0 100 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 PTHLHP12272 177 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 FOLR2P14207 255 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 ACVR1BP36896 505 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 CXCL12P48061 93 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 IDH3GP51553 393 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 SHBQ15464 509 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 DUSP5Q16690 384 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 ARSJQ5FYB0 599 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 DHRS7BQ6IAN0 325 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 UBALD2Q8IYN6 164 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 ARMC10Q8N2F6 343 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 OR6T1Q8NGN1 323 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 CCDC107Q8WV48 283 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 ZCCHC14Q8WYQ9 949 aaKnown RBP7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 PRRT1Q99946 306 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 CCDC3Q9BQI4 270 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 TMEM185BQ9H7F4 350 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 GPN1Q9HCN4 374 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 ASF1BQ9NVP2 202 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 THADAQ6YHU6 1953 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 A0A1B0GUH1 482 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 FITM1A5D6W6 292 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 FCMRO60667 390 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 RHBDL1O75783 438 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 NTN1O95631 604 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 MELTFP08582 738 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 TDGF1P13385 188 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 NFYBP25208 207 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 CD1BP29016 333 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 CALCRP30988 508 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 MMP15P51511 669 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 SLC16A1P53985 500 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 SCAND1P57086 179 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms