RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 PRG2P13727 222 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 CCNOP22674 350 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 STOMP27105 288 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 CHI3L1P36222 383 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-214ENST00000540865 KIR2DS4P43632 304 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 NPY4RP50391 375 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 GDI2P50395 445 aaKnown RBP3.78□□□□□ -1.8
SNHG1-214ENST00000540865 HMGA2P52926 109 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 CLDN8P56748 225 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 PPP1CBP62140 327 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 HSF2Q03933 536 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 PUDPQ08623 228 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 COX10Q12887 443 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 DCTN2Q13561 401 aaKnown RBP3.78□□□□□ -1.8
SNHG1-214ENST00000540865 SMU1Q2TAY7 513 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 UGT3A2Q3SY77 523 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 ZNF404Q494X3 552 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 PABPC1L2AQ5JQF8 200 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 KHDC1LQ5JSQ8 128 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 C6orf136Q5SQH8 315 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 ANXA8L1Q5VT79 327 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 CRIP3Q6Q6R5 217 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 WDR88Q6ZMY6 472 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 ZNF841Q6ZN19 808 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 ZNF836Q6ZNA1 936 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 VRK2Q86Y07 508 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 ZNF101Q8IZC7 436 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 KLHDC1Q8N7A1 406 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 C11orf44Q8N8P7 122 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 FNDC5Q8NAU1 212 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 SCCPDHQ8NBX0 429 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 OR2Z1Q8NG97 314 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 OR4K5Q8NGD3 323 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 OR8J2Q8NGG1 315 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 OR52P1PQ8NH57 321 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 OR6X1Q8NH79 312 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 OR5R1Q8NH85 324 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 TWIST2Q8WVJ9 160 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 ITLN1Q8WWA0 313 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 R3HDM4Q96D70 268 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 POM121L2Q96KW2 1035 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 WDFY2Q96P53 400 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 TMEM246Q9BRR3 403 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 C1orf50Q9BV19 199 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 MMP28Q9H239 520 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 CENPHQ9H3R5 247 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 TOR3AQ9H497 397 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 ARMC7Q9H6L4 198 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 MRPL39Q9NYK5 338 aaKnown RBP3.78□□□□□ -1.8
SNHG1-214ENST00000540865 GIMAP2Q9UG22 337 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 FOXJ3Q9UPW0 622 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 CAB39Q9Y376 341 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-214ENST00000540865 FAM96BQ9Y3D0 163 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 FIS1Q9Y3D6 152 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 U3KQK5 164 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 ALMS1Q8TCU4 4167 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 KIAA1109Q2LD37 5005 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 FRAS1Q86XX4 4008 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 LOC100509620A0A075B734 347 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 A0A087WUV0 522 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-214ENST00000540865 LCE6AA0A183 80 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 LRRC30A6NM36 301 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 MARCH11A6NNE9 402 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 PLPP3O14495 311 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 PLIN3O60664 434 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 GLRA3O75311 464 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 CPSF4O95639 269 aaKnown RBP3.77□□□□□ -1.81
SNHG1-214ENST00000540865 BGLAPP02818 100 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 QDPRP09417 244 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 FBP1P09467 338 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 CPA3P15088 417 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 IGLL1P15814 213 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 KITLGP21583 273 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 CBLP22681 906 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 TUBG1P23258 451 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 GCAP28676 217 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 CRATP43155 626 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 ZNF84P51523 738 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 ARHGDIAP52565 204 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 BIDP55957 195 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 GNG11P61952 73 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 PSG7Q13046 419 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 MAD2L1Q13257 205 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-214ENST00000540865 GALEQ14376 348 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 CASP8Q14790 479 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 ZNF181Q2M3W8 571 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 NSUN5P1Q3KNT7 163 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 CCDC153Q494R4 210 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 CASC10Q5T4H9 136 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 METTL11BQ5VVY1 283 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 PGBD2Q6P3X8 592 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 ARL9Q6T311 187 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 Q6ZR03 302 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 DCDC5Q6ZRR9 648 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 C1orf122Q6ZSJ8 110 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 RFPL4BQ6ZWI9 263 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 SLC35D2Q76EJ3 337 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 SERPINA11Q86U17 422 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 ANKRD46Q86W74 232 aa3.77□□□□□ -1.81
SNHG1-214ENST00000540865 NDUFA11Q86Y39 141 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms