RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 HLXQ14774 488 aaPredicted RBP11.87□□□□□ -0.51
SNHG1-213ENST00000540725 FGD3Q5JSP0 725 aa11.87□□□□□ -0.51
SNHG1-213ENST00000540725 FBXW12Q6X9E4 464 aa11.87□□□□□ -0.51
SNHG1-213ENST00000540725 ADCK1Q86TW2 530 aa11.87□□□□□ -0.51
SNHG1-213ENST00000540725 MUC20Q8N307 709 aaPredicted RBP11.87□□□□□ -0.51
SNHG1-213ENST00000540725 ATG16L2Q8NAA4 619 aa11.87□□□□□ -0.51
SNHG1-213ENST00000540725 FAM162AQ96A26 154 aa11.87□□□□□ -0.51
SNHG1-213ENST00000540725 RSRC1Q96IZ7 334 aaKnown RBP11.87□□□□□ -0.51
SNHG1-213ENST00000540725 DUX5Q96PT3 197 aa11.87□□□□□ -0.51
SNHG1-213ENST00000540725 GPX7Q96SL4 187 aaPredicted RBP11.87□□□□□ -0.51
SNHG1-213ENST00000540725 GPA33Q99795 319 aa11.87□□□□□ -0.51
SNHG1-213ENST00000540725 HOPXQ9BPY8 73 aaPredicted RBP11.87□□□□□ -0.51
SNHG1-213ENST00000540725 NUAK2Q9H093 628 aa11.87□□□□□ -0.51
SNHG1-213ENST00000540725 GCM1Q9NP62 436 aa11.87□□□□□ -0.51
SNHG1-213ENST00000540725 OR5V1Q9UGF6 321 aa11.87□□□□□ -0.51
SNHG1-213ENST00000540725 IL20RAQ9UHF4 553 aa11.87□□□□□ -0.51
SNHG1-213ENST00000540725 LRCH1Q9Y2L9 728 aa11.87□□□□□ -0.51
SNHG1-213ENST00000540725 POLR1DQ9Y2S0 133 aa11.87□□□□□ -0.51
SNHG1-213ENST00000540725 PCDHGB1Q9Y5G3 927 aa11.87□□□□□ -0.51
SNHG1-213ENST00000540725 IER3IP1Q9Y5U9 82 aa11.87□□□□□ -0.51
SNHG1-213ENST00000540725 A0A1W2PRQ8 180 aa11.86□□□□□ -0.51
SNHG1-213ENST00000540725 DNAJC9-AS1A6NH13 148 aa11.86□□□□□ -0.51
SNHG1-213ENST00000540725 CEACAM18A8MTB9 384 aa11.86□□□□□ -0.51
SNHG1-213ENST00000540725 IFNL4K9M1U5 179 aa11.86□□□□□ -0.51
SNHG1-213ENST00000540725 WIPF1O43516 503 aa11.86□□□□□ -0.51
SNHG1-213ENST00000540725 NCK1P16333 377 aa11.86□□□□□ -0.51
SNHG1-213ENST00000540725 PRTN3P24158 256 aa11.86□□□□□ -0.51
SNHG1-213ENST00000540725 FXYD6P3P58550 94 aa11.86□□□□□ -0.51
SNHG1-213ENST00000540725 FOXL1Q12952 345 aa11.86□□□□□ -0.51
SNHG1-213ENST00000540725 DGCR6Q14129 220 aa11.86□□□□□ -0.51
SNHG1-213ENST00000540725 KCNMB1Q16558 191 aa11.86□□□□□ -0.51
SNHG1-213ENST00000540725 OR2T2Q6IF00 324 aa11.86□□□□□ -0.51
SNHG1-213ENST00000540725 SLC27A4Q6P1M0 643 aa11.86□□□□□ -0.51
SNHG1-213ENST00000540725 C8orf82Q6P1X6 216 aaPredicted RBP11.86□□□□□ -0.51
SNHG1-213ENST00000540725 PTCHD4Q6ZW05 846 aa11.86□□□□□ -0.51
SNHG1-213ENST00000540725 BCL6BQ8N143 479 aaPredicted RBP11.86□□□□□ -0.51
SNHG1-213ENST00000540725 OR8G5Q8NG78 346 aa11.86□□□□□ -0.51
SNHG1-213ENST00000540725 OR10AD1Q8NGE0 317 aa11.86□□□□□ -0.51
SNHG1-213ENST00000540725 OR5L1Q8NGL2 311 aa11.86□□□□□ -0.51
SNHG1-213ENST00000540725 ZNF420Q8TAQ5 688 aaPredicted RBP11.86□□□□□ -0.51
SNHG1-213ENST00000540725 APOBEC3DQ96AK3 386 aaPredicted RBP11.86□□□□□ -0.51
SNHG1-213ENST00000540725 MEGF10Q96KG7 1140 aa11.86□□□□□ -0.51
SNHG1-213ENST00000540725 KCTD14Q9BQ13 255 aaPredicted RBP11.86□□□□□ -0.51
SNHG1-213ENST00000540725 GPANK1O95872 356 aa11.85□□□□□ -0.51
SNHG1-213ENST00000540725 WNT2P09544 360 aa11.85□□□□□ -0.51
SNHG1-213ENST00000540725 CDKN2AP42771 156 aaKnown RBP11.85□□□□□ -0.51
SNHG1-213ENST00000540725 OMPP47874 163 aa11.85□□□□□ -0.51
SNHG1-213ENST00000540725 HACD2Q6Y1H2 254 aa11.85□□□□□ -0.51
SNHG1-213ENST00000540725 DPY19L2P2Q6ZN68 376 aa11.85□□□□□ -0.51
SNHG1-213ENST00000540725 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.85□□□□□ -0.51
SNHG1-213ENST00000540725 OR13G1Q8NGZ3 307 aa11.85□□□□□ -0.51
SNHG1-213ENST00000540725 C1orf147Q96MC9 270 aaPredicted RBP11.85□□□□□ -0.51
SNHG1-213ENST00000540725 ZNF48Q96MX3 618 aaPredicted RBP11.85□□□□□ -0.51
SNHG1-213ENST00000540725 ZNF747Q9BV97 191 aa11.85□□□□□ -0.51
SNHG1-213ENST00000540725 C1QTNF5Q9BXJ0 243 aa11.85□□□□□ -0.51
SNHG1-213ENST00000540725 HDHD2Q9H0R4 259 aa11.85□□□□□ -0.51
SNHG1-213ENST00000540725 CCDC134Q9H6E4 229 aa11.85□□□□□ -0.51
SNHG1-213ENST00000540725 ZMAT3Q9HA38 289 aaKnown RBP11.85□□□□□ -0.51
SNHG1-213ENST00000540725 EFCAB1Q9HAE3 211 aa11.85□□□□□ -0.51
SNHG1-213ENST00000540725 NDUFAF4Q9P032 175 aa11.85□□□□□ -0.51
SNHG1-213ENST00000540725 RPS6KA6Q9UK32 745 aa11.85□□□□□ -0.51
SNHG1-213ENST00000540725 AURKCQ9UQB9 309 aa11.85□□□□□ -0.51
SNHG1-213ENST00000540725 FAM32AQ9Y421 112 aaKnown RBP11.85□□□□□ -0.51
SNHG1-213ENST00000540725 LHFPL6Q9Y693 200 aa11.85□□□□□ -0.51
SNHG1-213ENST00000540725 TRBV4-1A0A0J9YWV2 114 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 UNC119BA6NIH7 251 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 H0YL77 283 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 NDUFAB1O14561 156 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 ZNF205O95201 554 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 TXNDC12O95881 172 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 CYB5R3P00387 301 aaPredicted RBP11.84□□□□□ -0.51
SNHG1-213ENST00000540725 RPS2P15880 293 aaKnown RBP11.84□□□□□ -0.51
SNHG1-213ENST00000540725 RHCEP18577 417 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 CRABP1P29762 137 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 CD80P33681 288 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 CENPAP49450 140 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 SRP9P49458 86 aaKnown RBP11.84□□□□□ -0.51
SNHG1-213ENST00000540725 NUDT2P50583 147 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 RPS6KA3P51812 740 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 HIST1H3AP68431 136 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 PAX8Q06710 450 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 BAMBIQ13145 260 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 SEC23BQ15437 767 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 MEP1BQ16820 701 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 HIST2H3PS2Q5TEC6 136 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 PGM2L1Q6PCE3 622 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 DNM1P34Q6PK57 102 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 HIST2H3AQ71DI3 136 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 BHLHE23Q8NDY6 225 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 GJC3Q8NFK1 279 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 ZNF582Q96NG8 517 aaPredicted RBP11.84□□□□□ -0.51
SNHG1-213ENST00000540725 TSSK2Q96PF2 358 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 COQ7Q99807 217 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 SSBP3Q9BWW4 388 aaPredicted RBP11.84□□□□□ -0.51
SNHG1-213ENST00000540725 MS4A7Q9GZW8 240 aaPredicted RBP11.84□□□□□ -0.51
SNHG1-213ENST00000540725 TMEM165Q9HC07 324 aa11.84□□□□□ -0.51
SNHG1-213ENST00000540725 KRCC1Q9NPI7 259 aaPredicted RBP11.84□□□□□ -0.51
SNHG1-213ENST00000540725 WNK1Q9H4A3 2382 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 IGLV1-36A0A0B4J1U3 117 aa11.83□□□□□ -0.52
SNHG1-213ENST00000540725 IGHV3-64DA0A0J9YX35 117 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms