RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 IGHV4-38-2P0DP08 117 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 TROVE2P10155 538 aaKnown RBP eCLIP10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 ZNF26P17031 533 aaPredicted RBP10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 SDHAP31040 664 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 RBMXP38159 391 aaKnown RBP10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 BPIFB3P59826 476 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 KCNMB1Q16558 191 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 OCLNQ16625 522 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 IFI44LQ53G44 452 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 PDLIM3Q53GG5 364 aaPredicted RBP10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 CCDC92Q53HC0 331 aaPredicted RBP10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 C1orf94Q6P1W5 598 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 PGM2L1Q6PCE3 622 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 C16orf87Q6PH81 154 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 CBLL1Q75N03 491 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 RRM2BQ7LG56 351 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 NLRC3Q7RTR2 1065 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 ARPINQ7Z6K5 226 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 VTCN1Q7Z7D3 282 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 GLB1L2Q8IW92 636 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 C1orf87Q8N0U7 546 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 POU5F2Q8N7G0 328 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 ZNF420Q8TAQ5 688 aaPredicted RBP10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 SLC7A6Q92536 515 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 APOBEC3DQ96AK3 386 aaPredicted RBP10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 NEIL1Q96FI4 390 aaPredicted RBP10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 ZNF582Q96NG8 517 aaPredicted RBP10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 SLC30A2Q9BRI3 323 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 SYT4Q9H2B2 425 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 PRDM13Q9H4Q3 707 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 NRIP3Q9NQ35 241 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 SAR1AQ9NR31 198 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 VSX1Q9NZR4 365 aaPredicted RBP10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 MMP24Q9Y5R2 645 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 TRAV40A0A0B4J280 105 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 LOC100653049A0A140TA62 436 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 KIR2DS1A0A191URI9 304 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 A0A1B0GWJ7 208 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 LRRC30A6NM36 301 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 SLC16A7O60669 478 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 PTP4A3O75365 173 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 KRT34O76011 436 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 NDUFB2O95178 105 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 CYB5R3P00387 301 aaPredicted RBP10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 SELEP16581 610 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 GATA4P43694 442 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 GPR4P46093 362 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 HIST1H3AP68431 136 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 KRR1Q13601 381 aaKnown RBP10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 HLXQ14774 488 aaPredicted RBP10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 ZNF404Q494X3 552 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 ZNF362Q5T0B9 420 aaPredicted RBP10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 HIST2H3PS2Q5TEC6 136 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 OR2T2Q6IF00 324 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 TBPL2Q6SJ96 375 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 HIST2H3AQ71DI3 136 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 ADCK1Q86TW2 530 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 OR5AS1Q8N127 324 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 GJC3Q8NFK1 279 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 OR10AD1Q8NGE0 317 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 OR8B3Q8NGG8 313 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 ERGIC1Q969X5 290 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 OR8B2Q96RD0 313 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 COQ7Q99807 217 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 TMEM246Q9BRR3 403 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 HDHD2Q9H0R4 259 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 VIPAS39Q9H9C1 493 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 PTTG3PQ9NZH4 202 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 SIGLEC7Q9Y286 467 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 COA3Q9Y2R0 106 aaPredicted RBP10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 TRRAPQ9Y4A5 3859 aa10.04□□□□□ -0.8
CBX3P4-202ENST00000540428 CXCR6O00574 342 aa10.03□□□□□ -0.8
CBX3P4-202ENST00000540428 SLC22A2O15244 555 aa10.03□□□□□ -0.8
CBX3P4-202ENST00000540428 RER1O15258 196 aa10.03□□□□□ -0.8
CBX3P4-202ENST00000540428 MLNRO43193 412 aa10.03□□□□□ -0.8
CBX3P4-202ENST00000540428 ZNF682O95780 498 aa10.03□□□□□ -0.8
CBX3P4-202ENST00000540428 GPANK1O95872 356 aa10.03□□□□□ -0.8
CBX3P4-202ENST00000540428 DBHP09172 617 aa10.03□□□□□ -0.8
CBX3P4-202ENST00000540428 MDKP21741 143 aaPredicted RBP10.03□□□□□ -0.8
CBX3P4-202ENST00000540428 PITPNBP48739 271 aa10.03□□□□□ -0.8
CBX3P4-202ENST00000540428 FKBP9P1Q75LS8 142 aa10.03□□□□□ -0.8
CBX3P4-202ENST00000540428 CYP4Z1Q86W10 505 aa10.03□□□□□ -0.8
CBX3P4-202ENST00000540428 CELF2-AS1Q8N7Q2 184 aa10.03□□□□□ -0.8
CBX3P4-202ENST00000540428 Q8TCH9 128 aa10.03□□□□□ -0.8
CBX3P4-202ENST00000540428 TMIGD2Q96BF3 282 aa10.03□□□□□ -0.8
CBX3P4-202ENST00000540428 NUAK2Q9H093 628 aa10.03□□□□□ -0.8
CBX3P4-202ENST00000540428 CMTM6Q9NX76 183 aa10.03□□□□□ -0.8
CBX3P4-202ENST00000540428 POLR1DQ9Y2S0 133 aa10.03□□□□□ -0.8
CBX3P4-202ENST00000540428 CAPN7Q9Y6W3 813 aa10.03□□□□□ -0.8
CBX3P4-202ENST00000540428 IGHV3OR16-10A0A075B7F0 116 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 A0A1W2PRQ8 180 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 PHYHO14832 338 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 ZNF205O95201 554 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 TXNDC12O95881 172 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 IRF2P14316 349 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 CRABP1P29762 137 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 RPS6KA3P51812 740 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 DEFA6Q01524 100 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 COX10Q12887 443 aa10.02□□□□□ -0.81
CBX3P4-202ENST00000540428 DGCR6Q14129 220 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms