RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 GDPGP1Q6ZNW5 385 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 DCDC5Q6ZRR9 648 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 SLC30A8Q8IWU4 369 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 C1orf87Q8N0U7 546 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 OR13G1Q8NGZ3 307 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 LIPHQ8WWY8 451 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 TBX15Q96SF7 602 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 ALG12Q9BV10 488 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 PCDHAC1Q9H158 963 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 IGHV1-69DA0A0B4J2H0 117 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 C22orf46C9J442 243 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 PIP5K1CO60331 668 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 IGF2P01344 180 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 IGHV1-69P01742 117 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 OPN1SWP03999 348 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 OPN1MWP04001 364 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 OPN1MW2P0DN77 364 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 OPN1MW3P0DN78 364 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 MMP9P14780 707 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 CD247P20963 164 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 PSMB10P40306 273 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 MRPL19P49406 292 aaKnown RBP9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 NPY4RP50391 375 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 PAGE3Q5JUK9 113 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 FAM201AQ5SY85 155 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 CD276Q5ZPR3 534 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 BLOC1S3Q6QNY0 202 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 VASH1Q7L8A9 365 aaPredicted RBP9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 MAVSQ7Z434 540 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 MOGAT3Q86VF5 341 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 LDLRAD3Q86YD5 345 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 FUNDC1Q8IVP5 155 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 OR5AS1Q8N127 324 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 C11orf65Q8NCR3 313 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 CCDC197Q8NCU1 140 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 OR8G5Q8NG78 346 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 OR10AD1Q8NGE0 317 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 SGTBQ96EQ0 304 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 WDFY2Q96P53 400 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 SIKE1Q9BRV8 207 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 DPAGT1Q9H3H5 408 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 C20orf141Q9NUB4 165 aa9.64□□□□□ -0.87
CLSTN3-209ENST00000539982 ZNF816-ZNF321PA0A0X1KG74 233 aa9.63□□□□□ -0.87
CLSTN3-209ENST00000539982 A0A1W2PPL8 197 aa9.63□□□□□ -0.87
CLSTN3-209ENST00000539982 SGCEO43556 437 aa9.63□□□□□ -0.87
CLSTN3-209ENST00000539982 TSPAN9O75954 239 aa9.63□□□□□ -0.87
CLSTN3-209ENST00000539982 SCG5P05408 212 aa9.63□□□□□ -0.87
CLSTN3-209ENST00000539982 PMELP40967 661 aa9.63□□□□□ -0.87
CLSTN3-209ENST00000539982 RBM34P42696 430 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-209ENST00000539982 HTR5AP47898 357 aa9.63□□□□□ -0.87
CLSTN3-209ENST00000539982 LOXL3P58215 753 aa9.63□□□□□ -0.87
CLSTN3-209ENST00000539982 STX1BP61266 288 aa9.63□□□□□ -0.87
CLSTN3-209ENST00000539982 RPL27P61353 136 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-209ENST00000539982 SCRN3Q0VDG4 424 aa9.63□□□□□ -0.87
CLSTN3-209ENST00000539982 SF3A3Q12874 501 aaKnown RBP eCLIP9.63□□□□□ -0.876e-9■■■■■ 32.1
CLSTN3-209ENST00000539982 NKAIN4Q8IVV8 208 aa9.63□□□□□ -0.87
CLSTN3-209ENST00000539982 CLDN22Q8N7P3 220 aa9.63□□□□□ -0.87
CLSTN3-209ENST00000539982 PCYOX1LQ8NBM8 494 aa9.63□□□□□ -0.87
CLSTN3-209ENST00000539982 PFN4Q8NHR9 129 aa9.63□□□□□ -0.87
CLSTN3-209ENST00000539982 MRAPQ8TCY5 172 aa9.63□□□□□ -0.87
CLSTN3-209ENST00000539982 PPP1R14AQ96A00 147 aa9.63□□□□□ -0.87
CLSTN3-209ENST00000539982 SPDL1Q96EA4 605 aa9.63□□□□□ -0.87
CLSTN3-209ENST00000539982 ZNF582Q96NG8 517 aaPredicted RBP9.63□□□□□ -0.87
CLSTN3-209ENST00000539982 POLE4Q9NR33 117 aa9.63□□□□□ -0.87
CLSTN3-209ENST00000539982 ARL2BPQ9Y2Y0 163 aa9.63□□□□□ -0.87
CLSTN3-209ENST00000539982 IGHV3-64DA0A0J9YX35 117 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 A0A0U1RQK1 487 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 F5H5P2 479 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 J3QW42 95 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 MLNRO43193 412 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 DOK2O60496 412 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 IRF2P14316 349 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 FUT4P22083 530 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 TOP3AQ13472 1001 aaPredicted RBP9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 ALG10Q5BKT4 473 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 METTL11BQ5VVY1 283 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 OR2T2Q6IF00 324 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 C1orf94Q6P1W5 598 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 FBXW12Q6X9E4 464 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 PATL1Q86TB9 770 aaKnown RBP9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 PNLDC1Q8NA58 520 aaKnown RBP9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 SCCPDHQ8NBX0 429 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 OR5L1Q8NGL2 311 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 TMEM255BQ8WV15 326 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 TMEM239Q8WW34 195 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 LRTOMTQ8WZ04 291 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 LHX4Q969G2 390 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 RASD2Q96D21 266 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 EMC7Q9NPA0 242 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 CCDC167Q9P0B6 97 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 ERVK-18Q9QC07 812 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 HIF3AQ9Y2N7 669 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 USH1CQ9Y6N9 552 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 RYR3Q15413 4870 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 PLXNB1O43157 2135 aa9.62□□□□□ -0.87
CLSTN3-209ENST00000539982 TET2Q6N021 2002 aaPredicted RBP9.61□□□□□ -0.87
CLSTN3-209ENST00000539982 A0A0G2JND7 137 aa9.61□□□□□ -0.87
CLSTN3-209ENST00000539982 GPR37O15354 613 aa9.61□□□□□ -0.87
CLSTN3-209ENST00000539982 TGFBR2P37173 567 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms