RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 PTTG3PQ9NZH4 202 aa12.91□□□□□ -0.34
UBE3B-211ENST00000539843 IL20RAQ9UHF4 553 aa12.91□□□□□ -0.34
UBE3B-211ENST00000539843 NUP50Q9UKX7 468 aa12.91□□□□□ -0.34
UBE3B-211ENST00000539843 LRCH1Q9Y2L9 728 aa12.91□□□□□ -0.34
UBE3B-211ENST00000539843 STARD10Q9Y365 291 aa12.91□□□□□ -0.34
UBE3B-211ENST00000539843 IER3IP1Q9Y5U9 82 aa12.91□□□□□ -0.34
UBE3B-211ENST00000539843 SCG5P05408 212 aa12.9□□□□□ -0.34
UBE3B-211ENST00000539843 RPS2P15880 293 aaKnown RBP12.9□□□□□ -0.34
UBE3B-211ENST00000539843 NCK1P16333 377 aa12.9□□□□□ -0.34
UBE3B-211ENST00000539843 SLC6A6P31641 620 aa12.9□□□□□ -0.34
UBE3B-211ENST00000539843 PSME3P61289 254 aa12.9□□□□□ -0.34
UBE3B-211ENST00000539843 FOXL1Q12952 345 aa12.9□□□□□ -0.34
UBE3B-211ENST00000539843 MALLQ13021 153 aa12.9□□□□□ -0.34
UBE3B-211ENST00000539843 ZNF154Q13106 437 aa12.9□□□□□ -0.34
UBE3B-211ENST00000539843 TMEM255AQ5JRV8 349 aa12.9□□□□□ -0.34
UBE3B-211ENST00000539843 NLRC3Q7RTR2 1065 aa12.9□□□□□ -0.34
UBE3B-211ENST00000539843 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.9□□□□□ -0.34
UBE3B-211ENST00000539843 OR5AS1Q8N127 324 aa12.9□□□□□ -0.34
UBE3B-211ENST00000539843 OR8G5Q8NG78 346 aa12.9□□□□□ -0.34
UBE3B-211ENST00000539843 OR2AJ1Q8NGZ0 328 aa12.9□□□□□ -0.34
UBE3B-211ENST00000539843 C22orf15Q8WYQ4 148 aa12.9□□□□□ -0.34
UBE3B-211ENST00000539843 PLA2G12AQ9BZM1 189 aa12.9□□□□□ -0.34
UBE3B-211ENST00000539843 NUAK2Q9H093 628 aa12.9□□□□□ -0.34
UBE3B-211ENST00000539843 ADA2Q9NZK5 511 aa12.9□□□□□ -0.34
UBE3B-211ENST00000539843 A8MXK9 166 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 IMPA2O14732 288 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 RER1O15258 196 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 SPRY1O43609 319 aaPredicted RBP12.89□□□□□ -0.35
UBE3B-211ENST00000539843 PTP4A3O75365 173 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 ZNF12P17014 697 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 MDH1P40925 334 aaKnown RBP12.89□□□□□ -0.35
UBE3B-211ENST00000539843 OMPP47874 163 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 MTNR1AP48039 350 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 SLC6A9P48067 706 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 MMP16P51512 607 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 RAD23AP54725 363 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 UBA52P62987 128 aaKnown RBP12.89□□□□□ -0.35
UBE3B-211ENST00000539843 ECH1Q13011 328 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 ZMYND11Q15326 602 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 KCNMB1Q16558 191 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 OR2T2Q6IF00 324 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 LRRN1Q6UXK5 716 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 FBXW12Q6X9E4 464 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 OR52J3Q8NH60 311 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 SLC7A6Q92536 515 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 ERMAPQ96PL5 475 aaPredicted RBP12.89□□□□□ -0.35
UBE3B-211ENST00000539843 SSBP3Q9BWW4 388 aaPredicted RBP12.89□□□□□ -0.35
UBE3B-211ENST00000539843 MS4A7Q9GZW8 240 aaPredicted RBP12.89□□□□□ -0.35
UBE3B-211ENST00000539843 NSRP1Q9H0G5 558 aaKnown RBP12.89□□□□□ -0.35
UBE3B-211ENST00000539843 POFUT1Q9H488 388 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 GCM1Q9NP62 436 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 NDUFAF4Q9P032 175 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 GMPR2Q9P2T1 348 aaKnown RBP12.89□□□□□ -0.35
UBE3B-211ENST00000539843 ABCD2Q9UBJ2 740 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 MIOXQ9UGB7 285 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 OPN4Q9UHM6 478 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 TMCC3Q9ULS5 477 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 POLR3KQ9Y2Y1 108 aaPredicted RBP12.89□□□□□ -0.35
UBE3B-211ENST00000539843 NOP16Q9Y3C1 178 aaKnown RBP12.89□□□□□ -0.35
UBE3B-211ENST00000539843 PPIAL4AQ9Y536 164 aa12.89□□□□□ -0.35
UBE3B-211ENST00000539843 TMEM178BH3BS89 294 aa12.88□□□□□ -0.35
UBE3B-211ENST00000539843 GADD45GO95257 159 aa12.88□□□□□ -0.35
UBE3B-211ENST00000539843 TXNDC12O95881 172 aa12.88□□□□□ -0.35
UBE3B-211ENST00000539843 HLA-DQA2P01906 255 aa12.88□□□□□ -0.35
UBE3B-211ENST00000539843 FUT4P22083 530 aa12.88□□□□□ -0.35
UBE3B-211ENST00000539843 ZFP36P26651 326 aaKnown RBP12.88□□□□□ -0.35
UBE3B-211ENST00000539843 PRDX6P30041 224 aa12.88□□□□□ -0.35
UBE3B-211ENST00000539843 GNB2P62879 340 aa12.88□□□□□ -0.35
UBE3B-211ENST00000539843 SPIBQ01892 262 aa12.88□□□□□ -0.35
UBE3B-211ENST00000539843 CCDC92Q53HC0 331 aaPredicted RBP12.88□□□□□ -0.35
UBE3B-211ENST00000539843 C8orf82Q6P1X6 216 aaPredicted RBP12.88□□□□□ -0.35
UBE3B-211ENST00000539843 LEG1Q6P5S2 330 aa12.88□□□□□ -0.35
UBE3B-211ENST00000539843 Q6ZR03 302 aa12.88□□□□□ -0.35
UBE3B-211ENST00000539843 DEFB108BQ8NET1 73 aa12.88□□□□□ -0.35
UBE3B-211ENST00000539843 OR10AD1Q8NGE0 317 aa12.88□□□□□ -0.35
UBE3B-211ENST00000539843 OR8B3Q8NGG8 313 aa12.88□□□□□ -0.35
UBE3B-211ENST00000539843 OR11L1Q8NGX0 322 aa12.88□□□□□ -0.35
UBE3B-211ENST00000539843 MEGF10Q96KG7 1140 aa12.88□□□□□ -0.35
UBE3B-211ENST00000539843 OR8B2Q96RD0 313 aa12.88□□□□□ -0.35
UBE3B-211ENST00000539843 IFT27Q9BW83 186 aa12.88□□□□□ -0.35
UBE3B-211ENST00000539843 DCAF13Q9NV06 445 aaKnown RBP12.88□□□□□ -0.35
UBE3B-211ENST00000539843 TMEM100Q9NV29 134 aa12.88□□□□□ -0.35
UBE3B-211ENST00000539843 DCAF16Q9NXF7 216 aa12.88□□□□□ -0.35
UBE3B-211ENST00000539843 MAGEL2Q9UJ55 1249 aa12.88□□□□□ -0.35
UBE3B-211ENST00000539843 INSIG2Q9Y5U4 225 aa12.88□□□□□ -0.35
UBE3B-211ENST00000539843 TRBV4-1A0A0J9YWV2 114 aa12.87□□□□□ -0.35
UBE3B-211ENST00000539843 CEACAM18A8MTB9 384 aa12.87□□□□□ -0.35
UBE3B-211ENST00000539843 OR10H3O60404 316 aa12.87□□□□□ -0.35
UBE3B-211ENST00000539843 PPP1R3DO95685 299 aa12.87□□□□□ -0.35
UBE3B-211ENST00000539843 FSHBP01225 129 aa12.87□□□□□ -0.35
UBE3B-211ENST00000539843 ZNF26P17031 533 aaPredicted RBP12.87□□□□□ -0.35
UBE3B-211ENST00000539843 BAMBIQ13145 260 aa12.87□□□□□ -0.35
UBE3B-211ENST00000539843 HLXQ14774 488 aaPredicted RBP12.87□□□□□ -0.35
UBE3B-211ENST00000539843 RFX4Q33E94 735 aa12.87□□□□□ -0.35
UBE3B-211ENST00000539843 AWAT1Q58HT5 328 aa12.87□□□□□ -0.35
UBE3B-211ENST00000539843 SPRNQ5BIV9 151 aa12.87□□□□□ -0.35
UBE3B-211ENST00000539843 PTCHD4Q6ZW05 846 aa12.87□□□□□ -0.35
UBE3B-211ENST00000539843 SIGLECL1Q8N7X8 197 aa12.87□□□□□ -0.35
UBE3B-211ENST00000539843 ERGIC1Q969X5 290 aa12.87□□□□□ -0.35
UBE3B-211ENST00000539843 SLC25A28Q96A46 364 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms