RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 PPIAP62937 165 aaKnown RBP11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 INSM1Q01101 510 aaPredicted RBP11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 EMC4Q5J8M3 183 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 C1orf189Q5VU69 101 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 ANKRD16Q6P6B7 361 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 SLC16A13Q7RTY0 426 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 CLEC1AQ8NC01 280 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 OTOSQ8NHW6 89 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 THAP6Q8TBB0 222 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 NUDCD2Q8WVJ2 157 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 MCHR2Q969V1 340 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 INTS14Q96SY0 518 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 CRB3Q9BUF7 120 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 BARX1Q9HBU1 254 aaPredicted RBP11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 MRPS18BQ9Y676 258 aaKnown RBP11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 KIF26BQ2KJY2 2108 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 SIGLEC6O43699 453 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 NUDT14O95848 222 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 GP1BAP07359 652 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 SPP1P10451 314 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 PGAM2P15259 253 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 IL11P20809 199 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 CD27P26842 260 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 ID4P47928 161 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 DNM1P46Q6ZS02 220 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 SHISA6Q6ZSJ9 500 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 LANCL3Q6ZV70 420 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 ADAD2Q8NCV1 583 aaKnown RBP11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 ZBTB8AQ96BR9 441 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 SEH1LQ96EE3 360 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 OR11A1Q9GZK7 315 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 LMAN1LQ9HAT1 526 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 MUC3AQ02505 3323 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 LOC101059948A0A1B0GTJ6 334 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 RNF222A6NCQ9 220 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 HLA-DOBP13765 273 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 CXCR1P25024 350 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 ABCD3P28288 659 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 EIF1AXP47813 144 aaKnown RBP11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 CTAG1AP78358 180 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 MFGE8Q08431 387 aaPredicted RBP11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 PPP1R1AQ13522 171 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 SNTB1Q13884 538 aaKnown RBP11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 NSDHLQ15738 373 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 RAB11BQ15907 218 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 ACKR1Q16570 336 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 CORO6Q6QEF8 472 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 OR1J4Q8NGS1 313 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 NANPQ8TBE9 248 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 GPR148Q8TDV2 347 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 C4orf45Q96LM5 186 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 CST11Q9H112 138 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 ZNF275Q9NSD4 429 aaPredicted RBP11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 PURGQ9UJV8 347 aaKnown RBP11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 MTCH2Q9Y6C9 303 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 EIF4E2O60573 245 aaKnown RBP11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 ZNF354AO60765 605 aaPredicted RBP11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 RPA2P15927 270 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 CTLA4P16410 223 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 MGMTP16455 207 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 FGL1Q08830 312 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 PABPC1L2AQ5JQF8 200 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 GLT8D1Q68CQ7 371 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 H3F3CQ6NXT2 135 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 NUBPLQ8TB37 319 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 ZNF519Q8TB69 540 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 ELP5Q8TE02 316 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 WWTR1Q9GZV5 400 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 DUSP15Q9H1R2 295 aaPredicted RBP11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 ZNF304Q9HCX3 659 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 VSIG4Q9Y279 399 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 MMACHCQ9Y4U1 282 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 IGHV3-20A0A0C4DH32 117 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 C2orf72A6NCS6 295 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 ALG1L2C9J202 215 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 LMO7DNF2Z398 122 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 NPIPB7O75200 414 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 RENP00797 406 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 IL12BP29460 328 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 CSF2RBP32927 897 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 EGR3Q06889 387 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 ELAVL1Q15717 326 aaKnown RBP11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 C14orf28Q4W4Y0 310 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 C11orf87Q6NUJ2 197 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 OGFOD3Q6PK18 319 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 TMEM17Q86X19 198 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 DCBLD2Q96PD2 775 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 CHRNA10Q9GZZ6 450 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 FANCFQ9NPI8 374 aa11.24□□□□□ -0.61
SFSWAP-208ENST00000539506 UNC13CQ8NB66 2214 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 TRAV36DV7A0A075B6V5 113 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 PRSS37A4D1T9 235 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 MPTX1A8MV57 137 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 ZNF736B4DX44 427 aaPredicted RBP11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 CYB5AP00167 134 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 CALCRP30988 508 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 CSNK1EP49674 416 aaKnown RBP11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 HFEQ30201 348 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 RBMS3Q6XE24 437 aaKnown RBP11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 NUP54Q7Z3B4 507 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms