RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 GPR139Q6DWJ6 353 aa10.51□□□□□ -0.73
VAMP1-206ENST00000538970 FBXW12Q6X9E4 464 aa10.51□□□□□ -0.73
VAMP1-206ENST00000538970 RBMS3Q6XE24 437 aaKnown RBP10.51□□□□□ -0.73
VAMP1-206ENST00000538970 PTCHD4Q6ZW05 846 aa10.51□□□□□ -0.73
VAMP1-206ENST00000538970 OR5AS1Q8N127 324 aa10.51□□□□□ -0.73
VAMP1-206ENST00000538970 MUC20Q8N307 709 aaPredicted RBP10.51□□□□□ -0.73
VAMP1-206ENST00000538970 OR10AD1Q8NGE0 317 aa10.51□□□□□ -0.73
VAMP1-206ENST00000538970 FAM162AQ96A26 154 aa10.51□□□□□ -0.73
VAMP1-206ENST00000538970 RSRC1Q96IZ7 334 aaKnown RBP10.51□□□□□ -0.73
VAMP1-206ENST00000538970 MRI1Q9BV20 369 aa10.51□□□□□ -0.73
VAMP1-206ENST00000538970 NUAK2Q9H093 628 aa10.51□□□□□ -0.73
VAMP1-206ENST00000538970 RERGLQ9H628 205 aa10.51□□□□□ -0.73
VAMP1-206ENST00000538970 CCDC134Q9H6E4 229 aa10.51□□□□□ -0.73
VAMP1-206ENST00000538970 GCM1Q9NP62 436 aa10.51□□□□□ -0.73
VAMP1-206ENST00000538970 PTTG3PQ9NZH4 202 aa10.51□□□□□ -0.73
VAMP1-206ENST00000538970 OR5V1Q9UGF6 321 aa10.51□□□□□ -0.73
VAMP1-206ENST00000538970 IL20RAQ9UHF4 553 aa10.51□□□□□ -0.73
VAMP1-206ENST00000538970 DNAJC9-AS1A6NH13 148 aa10.5□□□□□ -0.73
VAMP1-206ENST00000538970 CEACAM18A8MTB9 384 aa10.5□□□□□ -0.73
VAMP1-206ENST00000538970 SOCS2O14508 198 aa10.5□□□□□ -0.73
VAMP1-206ENST00000538970 TXNDC12O95881 172 aa10.5□□□□□ -0.73
VAMP1-206ENST00000538970 HKR1P10072 659 aa10.5□□□□□ -0.73
VAMP1-206ENST00000538970 NCK1P16333 377 aa10.5□□□□□ -0.73
VAMP1-206ENST00000538970 HLXQ14774 488 aaPredicted RBP10.5□□□□□ -0.73
VAMP1-206ENST00000538970 ESCO2Q56NI9 601 aa10.5□□□□□ -0.73
VAMP1-206ENST00000538970 FGD3Q5JSP0 725 aa10.5□□□□□ -0.73
VAMP1-206ENST00000538970 OR2T2Q6IF00 324 aa10.5□□□□□ -0.73
VAMP1-206ENST00000538970 HACD2Q6Y1H2 254 aa10.5□□□□□ -0.73
VAMP1-206ENST00000538970 OR8G5Q8NG78 346 aa10.5□□□□□ -0.73
VAMP1-206ENST00000538970 MEGF10Q96KG7 1140 aa10.5□□□□□ -0.73
VAMP1-206ENST00000538970 C1orf147Q96MC9 270 aaPredicted RBP10.5□□□□□ -0.73
VAMP1-206ENST00000538970 COQ7Q99807 217 aa10.5□□□□□ -0.73
VAMP1-206ENST00000538970 ZMAT3Q9HA38 289 aaKnown RBP10.5□□□□□ -0.73
VAMP1-206ENST00000538970 NDUFAF4Q9P032 175 aa10.5□□□□□ -0.73
VAMP1-206ENST00000538970 ABCD2Q9UBJ2 740 aa10.5□□□□□ -0.73
VAMP1-206ENST00000538970 LRCH1Q9Y2L9 728 aa10.5□□□□□ -0.73
VAMP1-206ENST00000538970 POLR1DQ9Y2S0 133 aa10.5□□□□□ -0.73
VAMP1-206ENST00000538970 IER3IP1Q9Y5U9 82 aa10.5□□□□□ -0.73
VAMP1-206ENST00000538970 TRRAPQ9Y4A5 3859 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 A0A0G2JK05 382 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 TRBV4-1A0A0J9YWV2 114 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 IFNL4K9M1U5 179 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 DCTN6O00399 190 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 NDUFAB1O14561 156 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 MLNRO43193 412 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 GPANK1O95872 356 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 WNT2P09544 360 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 PRTN3P24158 256 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 CDKN2AP42771 156 aaKnown RBP10.49□□□□□ -0.73
VAMP1-206ENST00000538970 NUDT2P50583 147 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 RPS6KA3P51812 740 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 HIST1H3AP68431 136 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 PAX2Q02962 417 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 FOXL1Q12952 345 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 SEC23BQ15437 767 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 HIST2H3PS2Q5TEC6 136 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 SLC27A4Q6P1M0 643 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 PGM2L1Q6PCE3 622 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 DPY19L2P2Q6ZN68 376 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 HIST2H3AQ71DI3 136 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 BCL6BQ8N143 479 aaPredicted RBP10.49□□□□□ -0.73
VAMP1-206ENST00000538970 ATG16L2Q8NAA4 619 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 OR5L1Q8NGL2 311 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 ZNF420Q8TAQ5 688 aaPredicted RBP10.49□□□□□ -0.73
VAMP1-206ENST00000538970 APOBEC3DQ96AK3 386 aaPredicted RBP10.49□□□□□ -0.73
VAMP1-206ENST00000538970 DHRS1Q96LJ7 313 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 ZNF48Q96MX3 618 aaPredicted RBP10.49□□□□□ -0.73
VAMP1-206ENST00000538970 TSSK2Q96PF2 358 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 DUX5Q96PT3 197 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 GPA33Q99795 319 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 KCTD14Q9BQ13 255 aaPredicted RBP10.49□□□□□ -0.73
VAMP1-206ENST00000538970 ZNF747Q9BV97 191 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 C1QTNF5Q9BXJ0 243 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 HDHD2Q9H0R4 259 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 EFCAB1Q9HAE3 211 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 RPS6KA6Q9UK32 745 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 PCDHGB1Q9Y5G3 927 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 LHFPL6Q9Y693 200 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 WNK2Q9Y3S1 2297 aa10.49□□□□□ -0.73
VAMP1-206ENST00000538970 ARHGAP32A7KAX9 2087 aa10.48□□□□□ -0.73
VAMP1-206ENST00000538970 IGLV1-36A0A0B4J1U3 117 aa10.48□□□□□ -0.73
VAMP1-206ENST00000538970 UNC119BA6NIH7 251 aa10.48□□□□□ -0.73
VAMP1-206ENST00000538970 H0YL77 283 aa10.48□□□□□ -0.73
VAMP1-206ENST00000538970 CCDC22O60826 627 aa10.48□□□□□ -0.73
VAMP1-206ENST00000538970 CYB5R3P00387 301 aaPredicted RBP10.48□□□□□ -0.73
VAMP1-206ENST00000538970 RPS2P15880 293 aaKnown RBP10.48□□□□□ -0.73
VAMP1-206ENST00000538970 RHCEP18577 417 aa10.48□□□□□ -0.73
VAMP1-206ENST00000538970 CPT2P23786 658 aa10.48□□□□□ -0.73
VAMP1-206ENST00000538970 CRABP1P29762 137 aa10.48□□□□□ -0.73
VAMP1-206ENST00000538970 CD80P33681 288 aa10.48□□□□□ -0.73
VAMP1-206ENST00000538970 SRP9P49458 86 aaKnown RBP10.48□□□□□ -0.73
VAMP1-206ENST00000538970 PAX8Q06710 450 aa10.48□□□□□ -0.73
VAMP1-206ENST00000538970 COX10Q12887 443 aa10.48□□□□□ -0.73
VAMP1-206ENST00000538970 MEP1BQ16820 701 aa10.48□□□□□ -0.73
VAMP1-206ENST00000538970 DNM1P34Q6PK57 102 aa10.48□□□□□ -0.73
VAMP1-206ENST00000538970 KLBQ86Z14 1044 aa10.48□□□□□ -0.73
VAMP1-206ENST00000538970 PARP8Q8N3A8 854 aa10.48□□□□□ -0.73
VAMP1-206ENST00000538970 FAM86B1Q8N7N1 296 aa10.48□□□□□ -0.73
VAMP1-206ENST00000538970 GJC3Q8NFK1 279 aa10.48□□□□□ -0.73
VAMP1-206ENST00000538970 OR13G1Q8NGZ3 307 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms