RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 MEIOCA2RUB1 952 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 MEGF11A6BM72 1044 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 SULT1B1O43704 296 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 DOK2O60496 412 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 TPPPO94811 219 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 RAB11BQ15907 218 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 SLC36A2Q495M3 483 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 PDSS1Q5T2R2 415 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 FAM166AQ6J272 317 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 IZUMO1Q8IYV9 350 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 GALNT16Q8N428 558 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 NABP1Q96AH0 204 aa13.09□□□□□ -0.31
ATL3-203ENST00000538786 ZNF275Q9NSD4 429 aaPredicted RBP13.09□□□□□ -0.31
ATL3-203ENST00000538786 DDX28Q9NUL7 540 aaKnown RBP13.09□□□□□ -0.31
ATL3-203ENST00000538786 CDV3Q9UKY7 258 aaKnown RBP13.09□□□□□ -0.31
ATL3-203ENST00000538786 ITGA5P08648 1049 aa13.08□□□□□ -0.32
ATL3-203ENST00000538786 CD3GP09693 182 aa13.08□□□□□ -0.32
ATL3-203ENST00000538786 MNDAP41218 407 aa13.08□□□□□ -0.32
ATL3-203ENST00000538786 ZNF84P51523 738 aa13.08□□□□□ -0.32
ATL3-203ENST00000538786 GRB2P62993 217 aaKnown RBP13.08□□□□□ -0.32
ATL3-203ENST00000538786 TGIF1Q15583 401 aa13.08□□□□□ -0.32
ATL3-203ENST00000538786 KRT74Q7RTS7 529 aa13.08□□□□□ -0.32
ATL3-203ENST00000538786 TOMM5Q8N4H5 51 aa13.08□□□□□ -0.32
ATL3-203ENST00000538786 C15orf40Q8WUR7 153 aa13.08□□□□□ -0.32
ATL3-203ENST00000538786 ROBO4Q8WZ75 1007 aa13.08□□□□□ -0.32
ATL3-203ENST00000538786 RBM24Q9BX46 236 aaKnown RBP13.08□□□□□ -0.32
ATL3-203ENST00000538786 TTTY12Q9BZ98 90 aa13.08□□□□□ -0.32
ATL3-203ENST00000538786 NLKQ9UBE8 527 aa13.08□□□□□ -0.32
ATL3-203ENST00000538786 CACNG2Q9Y698 323 aa13.08□□□□□ -0.32
ATL3-203ENST00000538786 SYT7O43581 403 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 CTSSP25774 331 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 SLC6A1P30531 599 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 RFC3P40938 356 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 TPTEP56180 551 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 ENDOGQ14249 297 aaKnown RBP13.07□□□□□ -0.32
ATL3-203ENST00000538786 TMEM69Q5SWH9 247 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 ATP1A1-AS1Q5TC04 95 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 LINGO2Q7L985 606 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 PRSS45Q7RTY3 260 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 LUZP2Q86TE4 346 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 SERPINA12Q8IW75 414 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 PLPP7Q8NBV4 271 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 MDS2Q8NDY4 140 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 PRSS33Q8NF86 280 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 GJC3Q8NFK1 279 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 KLF13Q9Y2Y9 288 aaPredicted RBP13.07□□□□□ -0.32
ATL3-203ENST00000538786 OR5H15A6NDH6 313 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 NME2P1O60361 137 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 LMX1BO60663 402 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 CYTIPO60759 359 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 SP1P08047 785 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 CELA3AP09093 270 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 NME2P22392 152 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 CDK2P24941 298 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 PTH2RP49190 550 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 SRP9P49458 86 aaKnown RBP13.07□□□□□ -0.32
ATL3-203ENST00000538786 PRKXP51817 358 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 RRADP55042 308 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 SOX8P57073 446 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 ZNF121P58317 390 aaPredicted RBP13.07□□□□□ -0.32
ATL3-203ENST00000538786 HIST1H3AP68431 136 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 MRPS10P82664 201 aaKnown RBP13.07□□□□□ -0.32
ATL3-203ENST00000538786 MRPS34P82930 218 aaKnown RBP13.07□□□□□ -0.32
ATL3-203ENST00000538786 HIST2H3PS2Q5TEC6 136 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 RSBN1Q5VWQ0 802 aaPredicted RBP13.07□□□□□ -0.32
ATL3-203ENST00000538786 HIST2H3AQ71DI3 136 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 AAED1Q7RTV5 226 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 NKAIN3Q8N8D7 197 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 OR51D1Q8NGF3 324 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 FAM3DQ96BQ1 224 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 ZNF775Q96BV0 537 aaPredicted RBP13.07□□□□□ -0.32
ATL3-203ENST00000538786 FGGYQ96C11 551 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 ASCL3Q9NQ33 180 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 MED12Q93074 2177 aa13.07□□□□□ -0.32
ATL3-203ENST00000538786 AHCTF1Q8WYP5 2266 aa13.06□□□□□ -0.32
ATL3-203ENST00000538786 LOC100289279A0A1B0GTE1 492 aa13.06□□□□□ -0.32
ATL3-203ENST00000538786 A0A1B0GVI7 797 aa13.06□□□□□ -0.32
ATL3-203ENST00000538786 ARGFXA6NJG6 315 aa13.06□□□□□ -0.32
ATL3-203ENST00000538786 CENPXA8MT69 81 aa13.06□□□□□ -0.32
ATL3-203ENST00000538786 NTF4P34130 210 aa13.06□□□□□ -0.32
ATL3-203ENST00000538786 MAGEA5P43359 124 aa13.06□□□□□ -0.32
ATL3-203ENST00000538786 CX3CR1P49238 355 aa13.06□□□□□ -0.32
ATL3-203ENST00000538786 POU3F4P49335 361 aa13.06□□□□□ -0.32
ATL3-203ENST00000538786 LHX2P50458 406 aa13.06□□□□□ -0.32
ATL3-203ENST00000538786 RNASE12Q5GAN4 147 aaKnown RBP13.06□□□□□ -0.32
ATL3-203ENST00000538786 FAM27BQ5VT28 67 aa13.06□□□□□ -0.32
ATL3-203ENST00000538786 SLC25A25Q6KCM7 469 aa13.06□□□□□ -0.32
ATL3-203ENST00000538786 GLCCI1Q86VQ1 547 aa13.06□□□□□ -0.32
ATL3-203ENST00000538786 OR51A2Q8NGJ7 313 aa13.06□□□□□ -0.32
ATL3-203ENST00000538786 OR6M1Q8NGM8 313 aa13.06□□□□□ -0.32
ATL3-203ENST00000538786 SLC25A28Q96A46 364 aa13.06□□□□□ -0.32
ATL3-203ENST00000538786 C7orf50Q9BRJ6 194 aaKnown RBP13.06□□□□□ -0.32
ATL3-203ENST00000538786 MARVELD1Q9BSK0 173 aa13.06□□□□□ -0.32
ATL3-203ENST00000538786 PLEKHA1Q9HB21 404 aa13.06□□□□□ -0.32
ATL3-203ENST00000538786 SLC17A5Q9NRA2 495 aa13.06□□□□□ -0.32
ATL3-203ENST00000538786 PCNX2A6NKB5 2137 aa13.06□□□□□ -0.32
ATL3-203ENST00000538786 OTOGLQ3ZCN5 2332 aa13.06□□□□□ -0.32
ATL3-203ENST00000538786 A0A1B0GTI1 187 aa13.05□□□□□ -0.32
ATL3-203ENST00000538786 LOC390937A0A1W2PQ73 354 aa13.05□□□□□ -0.32
ATL3-203ENST00000538786 FAM166BA8MTA8 275 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms