RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 OR5H15A6NDH6 313 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 OR5H1A6NKK0 313 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 A6NLC8 198 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 OR4C45A6NMZ5 311 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 ZNF724A8MTY0 619 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 RAB27BO00194 218 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 GRM6O15303 877 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 UPK3AO75631 287 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 ADAP1O75689 374 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 CXCL14O95715 111 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 GCGP01275 180 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 ASGR1P07306 291 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 DCNP07585 359 aaKnown RBP6.01□□□□□ -1.45
USP28-207ENST00000538475 OR5AC1P0C628 307 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 METTL15P1P0C7V9 234 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 RNF224P0DH78 156 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 F3P13726 295 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 FOLR1P15328 257 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 CHATP28329 748 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 CD80P33681 288 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 ECI1P42126 302 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 SSR2P43308 183 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 POU3F4P49335 361 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 OR2B8PP59922 312 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 RBM39Q14498 530 aaKnown RBP6.01□□□□□ -1.45
USP28-207ENST00000538475 CLINT1Q14677 625 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 RSU1Q15404 277 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 C2orf76Q3KRA6 126 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 MESTQ5EB52 335 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 KRBOX4Q5JUW0 171 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 C1orf100Q5SVJ3 147 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 SLC8B1Q6J4K2 584 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 MFSD12Q6NUT3 480 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 ADAM5Q6NVV9 412 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 PAPD4Q6PIY7 484 aaKnown RBP6.01□□□□□ -1.45
USP28-207ENST00000538475 UNQ6126/PRO20091Q6UXV3 157 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 SLC24A5Q71RS6 500 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 SLC35D2Q76EJ3 337 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 MDGA2Q7Z553 956 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 TMED4Q7Z7H5 227 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 MMP21Q8N119 569 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 ARL14Q8N4G2 192 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 NKAIN3Q8N8D7 197 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 EXD3Q8N9H8 876 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 OR9K2Q8NGE7 335 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 OR52E2Q8NGJ4 325 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 OR6K2Q8NGY2 324 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 OR2L2Q8NH16 312 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 STT3BQ8TCJ2 826 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 LIPHQ8WWY8 451 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 METTL21AQ8WXB1 218 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 RGP1Q92546 391 aaPredicted RBP6.01□□□□□ -1.45
USP28-207ENST00000538475 GCDHQ92947 438 aaPredicted RBP6.01□□□□□ -1.45
USP28-207ENST00000538475 TRIM43Q96BQ3 446 aaPredicted RBP6.01□□□□□ -1.45
USP28-207ENST00000538475 SLC35A4Q96G79 324 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 SLC41A2Q96JW4 573 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 GPR174Q9BXC1 333 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 SELENOIQ9C0D9 397 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 SLC25A18Q9H1K4 315 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 LINC00597Q9H2U6 94 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 SRMSQ9H3Y6 488 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 ZNF552Q9H707 407 aaPredicted RBP6.01□□□□□ -1.45
USP28-207ENST00000538475 TAF9BQ9HBM6 251 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 KCNJ16Q9NPI9 418 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 CKLFQ9UBR5 152 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 ZNF230Q9UIE0 474 aaPredicted RBP6.01□□□□□ -1.45
USP28-207ENST00000538475 MBD1Q9UIS9 605 aaPredicted RBP6.01□□□□□ -1.45
USP28-207ENST00000538475 GTF2A1LQ9UNN4 478 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 KCNK6Q9Y257 313 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 MRPS33Q9Y291 106 aaKnown RBP6.01□□□□□ -1.45
USP28-207ENST00000538475 ASF1AQ9Y294 204 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 HDGFL3Q9Y3E1 203 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 ENTPD2Q9Y5L3 495 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 A0A087WV62 115 aa6□□□□□ -1.45
USP28-207ENST00000538475 BORCS7-ASMTA0A0B4J1R7 106 aa6□□□□□ -1.45
USP28-207ENST00000538475 A0A0B4J2E0 115 aa6□□□□□ -1.45
USP28-207ENST00000538475 TMEM269A0A1B0GVZ9 245 aa6□□□□□ -1.45
USP28-207ENST00000538475 A0A1B0GX12 115 aa6□□□□□ -1.45
USP28-207ENST00000538475 A0A1W2PQ45 241 aaPredicted RBP6□□□□□ -1.45
USP28-207ENST00000538475 A0A1W2PQY0 241 aa6□□□□□ -1.45
USP28-207ENST00000538475 ZC3H12DA2A288 527 aaKnown RBP6□□□□□ -1.45
USP28-207ENST00000538475 C5orf51A6NDU8 294 aa6□□□□□ -1.45
USP28-207ENST00000538475 URADA6NGE7 173 aa6□□□□□ -1.45
USP28-207ENST00000538475 A8MWP6 167 aa6□□□□□ -1.45
USP28-207ENST00000538475 TRDCB7Z8K6 153 aa6□□□□□ -1.45
USP28-207ENST00000538475 ADM5C9JUS6 153 aa6□□□□□ -1.45
USP28-207ENST00000538475 NPIPB6E9PJ23 425 aa6□□□□□ -1.45
USP28-207ENST00000538475 K7ERQ8 282 aa6□□□□□ -1.45
USP28-207ENST00000538475 M0R036 132 aa6□□□□□ -1.45
USP28-207ENST00000538475 LDLRAD4O15165 306 aa6□□□□□ -1.45
USP28-207ENST00000538475 OR1F1O43749 312 aa6□□□□□ -1.45
USP28-207ENST00000538475 DUSP11O75319 330 aaKnown RBP6□□□□□ -1.45
USP28-207ENST00000538475 OR2C1O95371 312 aa6□□□□□ -1.45
USP28-207ENST00000538475 SFT2D2O95562 160 aa6□□□□□ -1.45
USP28-207ENST00000538475 ABHD16AO95870 558 aa6□□□□□ -1.45
USP28-207ENST00000538475 TXNDC12O95881 172 aa6□□□□□ -1.45
USP28-207ENST00000538475 SOD2P04179 222 aa6□□□□□ -1.45
USP28-207ENST00000538475 CD3EP07766 207 aa6□□□□□ -1.45
USP28-207ENST00000538475 SNRNP70P08621 437 aaKnown RBP6□□□□□ -1.45
USP28-207ENST00000538475 CLUP10909 449 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms