RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 NDEL1Q9GZM8 345 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 DYNLRB1Q9NP97 96 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 CMC2Q9NRP2 79 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 TBC1D23Q9NUY8 699 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 DCAF16Q9NXF7 216 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 PLEK2Q9NYT0 353 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 DNAJB9Q9UBS3 223 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 GRIP1Q9Y3R0 1128 aa7.15□□□□□ -1.26
SPARC-208ENST00000538026 VSTM5A8MXK1 200 aa7.14□□□□□ -1.27
SPARC-208ENST00000538026 MITFO75030 526 aaPredicted RBP7.14□□□□□ -1.27
SPARC-208ENST00000538026 TACSTD2P09758 323 aa7.14□□□□□ -1.27
SPARC-208ENST00000538026 ACSM4P0C7M7 580 aa7.14□□□□□ -1.27
SPARC-208ENST00000538026 GSTM3P21266 225 aa7.14□□□□□ -1.27
SPARC-208ENST00000538026 USF1P22415 310 aaPredicted RBP7.14□□□□□ -1.27
SPARC-208ENST00000538026 GUCA1AP43080 201 aaPredicted RBP7.14□□□□□ -1.27
SPARC-208ENST00000538026 CENPAP49450 140 aa7.14□□□□□ -1.27
SPARC-208ENST00000538026 PRSS12P56730 875 aa7.14□□□□□ -1.27
SPARC-208ENST00000538026 RPS23P62266 143 aaKnown RBP7.14□□□□□ -1.27
SPARC-208ENST00000538026 CCL8P80075 99 aa7.14□□□□□ -1.27
SPARC-208ENST00000538026 EFNB1P98172 346 aa7.14□□□□□ -1.27
SPARC-208ENST00000538026 GINS1Q14691 196 aa7.14□□□□□ -1.27
SPARC-208ENST00000538026 CARTPTQ16568 116 aa7.14□□□□□ -1.27
SPARC-208ENST00000538026 ZNF718Q3SXZ3 478 aa7.14□□□□□ -1.27
SPARC-208ENST00000538026 RPL13AP3Q6NVV1 102 aa7.14□□□□□ -1.27
SPARC-208ENST00000538026 SHQ1Q6PI26 577 aaKnown RBP7.14□□□□□ -1.27
SPARC-208ENST00000538026 AMIGO2Q86SJ2 522 aa7.14□□□□□ -1.27
SPARC-208ENST00000538026 BBS1Q8NFJ9 593 aa7.14□□□□□ -1.27
SPARC-208ENST00000538026 GJC3Q8NFK1 279 aa7.14□□□□□ -1.27
SPARC-208ENST00000538026 OR2T33Q8NG76 320 aa7.14□□□□□ -1.27
SPARC-208ENST00000538026 ST7LQ8TDW4 575 aa7.14□□□□□ -1.27
SPARC-208ENST00000538026 POP5Q969H6 163 aaKnown RBP7.14□□□□□ -1.27
SPARC-208ENST00000538026 CMBLQ96DG6 245 aa7.14□□□□□ -1.27
SPARC-208ENST00000538026 MSI2Q96DH6 328 aaKnown RBP7.14□□□□□ -1.27
SPARC-208ENST00000538026 AMELYQ99218 206 aa7.14□□□□□ -1.27
SPARC-208ENST00000538026 COQ7Q99807 217 aa7.14□□□□□ -1.27
SPARC-208ENST00000538026 C1QTNF5Q9BXJ0 243 aa7.14□□□□□ -1.27
SPARC-208ENST00000538026 MS4A5Q9H3V2 200 aa7.14□□□□□ -1.27
SPARC-208ENST00000538026 MSL2Q9HCI7 577 aa7.14□□□□□ -1.27
SPARC-208ENST00000538026 HINT3Q9NQE9 182 aaKnown RBP7.14□□□□□ -1.27
SPARC-208ENST00000538026 TMEFF2Q9UIK5 374 aaPredicted RBP7.14□□□□□ -1.27
SPARC-208ENST00000538026 NDRG4Q9ULP0 352 aaKnown RBP7.14□□□□□ -1.27
SPARC-208ENST00000538026 COMMD3-BMI1R4GMX3 469 aa7.14□□□□□ -1.27
SPARC-208ENST00000538026 A0A1B0GWJ7 208 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 A0A1W2PPW3 197 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 H3BNX3 289 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 NDUFS8O00217 210 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 SURF4O15260 269 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 SPRY3O43610 288 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 CDC14BO60729 498 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 ATP5HO75947 161 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 ABHD16AO95870 558 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 ADH4P08319 380 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 CSF3P09919 207 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 OSMP13725 252 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 ZNF23P17027 643 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 KITLGP21583 273 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 SLC2A5P22732 501 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 OTX1P32242 354 aaPredicted RBP7.13□□□□□ -1.27
SPARC-208ENST00000538026 GRK5P34947 590 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 POLR2IP36954 125 aaKnown RBP7.13□□□□□ -1.27
SPARC-208ENST00000538026 LMO4P61968 165 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 CDK5R2Q13319 367 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 GGTLC2Q14390 218 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 GK3PQ14409 553 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 ATP6AP1Q15904 470 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 TSTQ16762 297 aaKnown RBP7.13□□□□□ -1.27
SPARC-208ENST00000538026 NKPD1Q17RQ9 610 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 TEX30Q5JUR7 227 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 C6orf52Q5T4I8 152 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 TMEM154Q6P9G4 183 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 DNM1P34Q6PK57 102 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 TIGD4Q8IY51 512 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 PROKR2Q8NFJ6 384 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 OR52L1Q8NGH7 329 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 LRTOMTQ8WZ04 291 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 HAVCR1Q96D42 359 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 NRBF2Q96F24 287 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 C1orf159Q96HA4 380 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 PIMREGQ9BSJ6 248 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 MARCH7Q9H992 704 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 ZNF275Q9NSD4 429 aaPredicted RBP7.13□□□□□ -1.27
SPARC-208ENST00000538026 DDX28Q9NUL7 540 aaKnown RBP7.13□□□□□ -1.27
SPARC-208ENST00000538026 SLCO1C1Q9NYB5 712 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 NKIRAS2Q9NYR9 191 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 TREM2Q9NZC2 230 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 EIF3KQ9UBQ5 218 aaKnown RBP7.13□□□□□ -1.27
SPARC-208ENST00000538026 ATPIF1Q9UII2 106 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 PURGQ9UJV8 347 aaKnown RBP7.13□□□□□ -1.27
SPARC-208ENST00000538026 FBXO9Q9UK97 447 aaPredicted RBP7.13□□□□□ -1.27
SPARC-208ENST00000538026 BAIAP2Q9UQB8 552 aa7.13□□□□□ -1.27
SPARC-208ENST00000538026 CCDC182A6NF36 153 aa7.12□□□□□ -1.27
SPARC-208ENST00000538026 PRR32B1ATL7 298 aa7.12□□□□□ -1.27
SPARC-208ENST00000538026 E9PQ18 207 aa7.12□□□□□ -1.27
SPARC-208ENST00000538026 F5H5K5 113 aa7.12□□□□□ -1.27
SPARC-208ENST00000538026 H0YL77 283 aa7.12□□□□□ -1.27
SPARC-208ENST00000538026 H3BSA7 217 aa7.12□□□□□ -1.27
SPARC-208ENST00000538026 M0R129 80 aa7.12□□□□□ -1.27
SPARC-208ENST00000538026 ZNF593O00488 134 aaPredicted RBP7.12□□□□□ -1.27
SPARC-208ENST00000538026 GNGT2O14610 69 aa7.12□□□□□ -1.27
SPARC-208ENST00000538026 POU1F1P28069 291 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms