RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 MAP6Q96JE9 813 aa11.22□□□□□ -0.61
PRKDC-206ENST00000536429 COQ7Q99807 217 aa11.22□□□□□ -0.61
PRKDC-206ENST00000536429 SOX7Q9BT81 388 aa11.22□□□□□ -0.61
PRKDC-206ENST00000536429 WDR76Q9H967 626 aa11.22□□□□□ -0.61
PRKDC-206ENST00000536429 ELOVL3Q9HB03 270 aa11.22□□□□□ -0.61
PRKDC-206ENST00000536429 TBCCD1Q9NVR7 557 aa11.22□□□□□ -0.61
PRKDC-206ENST00000536429 FAM183AA6NL82 134 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 SPRY3O43610 288 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 CDC14BO60729 498 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 LILRA1O75019 489 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 RP2O75695 350 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 IGHV1-46P01743 117 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 SPI1P17947 270 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 IL2RGP31785 369 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 RASSF2P50749 326 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 ZNF81P51508 661 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 ARHGDIAP52565 204 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 SLC25A1P53007 311 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 TSTQ16762 297 aaKnown RBP11.21□□□□□ -0.61
PRKDC-206ENST00000536429 LINC01590Q5TEZ4 76 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 C1orf146Q5VVC0 180 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 OR2T4Q8NH00 348 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 TEX47Q8TBZ9 253 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 SNX33Q8WV41 574 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 CMBLQ96DG6 245 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 PITX2Q99697 317 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 HDHD2Q9H0R4 259 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 YY1AP1Q9H869 796 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 MSL2Q9HCI7 577 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 YAE1D1Q9NRH1 226 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 CMC2Q9NRP2 79 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 PTTG3PQ9NZH4 202 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 KLHL21Q9UJP4 597 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 BAIAP2Q9UQB8 552 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 CACNG2Q9Y698 323 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 COMMD3-BMI1R4GMX3 469 aa11.21□□□□□ -0.61
PRKDC-206ENST00000536429 RIIAD1A6NNX1 92 aa11.2□□□□□ -0.62
PRKDC-206ENST00000536429 WNT9BO14905 357 aa11.2□□□□□ -0.62
PRKDC-206ENST00000536429 OSMP13725 252 aa11.2□□□□□ -0.62
PRKDC-206ENST00000536429 ZNF16P17020 682 aaPredicted RBP11.2□□□□□ -0.62
PRKDC-206ENST00000536429 HOXB6P17509 224 aaKnown RBP11.2□□□□□ -0.62
PRKDC-206ENST00000536429 GRK5P34947 590 aa11.2□□□□□ -0.62
PRKDC-206ENST00000536429 PRSS12P56730 875 aa11.2□□□□□ -0.62
PRKDC-206ENST00000536429 GINS1Q14691 196 aa11.2□□□□□ -0.62
PRKDC-206ENST00000536429 HLXQ14774 488 aaPredicted RBP11.2□□□□□ -0.62
PRKDC-206ENST00000536429 C6orf52Q5T4I8 152 aa11.2□□□□□ -0.62
PRKDC-206ENST00000536429 TMEM236Q5W0B7 351 aa11.2□□□□□ -0.62
PRKDC-206ENST00000536429 SHQ1Q6PI26 577 aaKnown RBP11.2□□□□□ -0.62
PRKDC-206ENST00000536429 ARL9Q6T311 187 aa11.2□□□□□ -0.62
PRKDC-206ENST00000536429 UNQ6126/PRO20091Q6UXV3 157 aa11.2□□□□□ -0.62
PRKDC-206ENST00000536429 ASRGL1Q7L266 308 aa11.2□□□□□ -0.62
PRKDC-206ENST00000536429 NAA40Q86UY6 237 aa11.2□□□□□ -0.62
PRKDC-206ENST00000536429 RDH5Q92781 318 aa11.2□□□□□ -0.62
PRKDC-206ENST00000536429 PTP4A1Q93096 173 aa11.2□□□□□ -0.62
PRKDC-206ENST00000536429 CDADC1Q9BWV3 514 aa11.2□□□□□ -0.62
PRKDC-206ENST00000536429 ZNF275Q9NSD4 429 aaPredicted RBP11.2□□□□□ -0.62
PRKDC-206ENST00000536429 ATPIF1Q9UII2 106 aa11.2□□□□□ -0.62
PRKDC-206ENST00000536429 PURGQ9UJV8 347 aaKnown RBP11.2□□□□□ -0.62
PRKDC-206ENST00000536429 C5orf63A6NC05 138 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 F5H5K5 113 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 H3BSA7 217 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 TIMM8AO60220 97 aaPredicted RBP11.19□□□□□ -0.62
PRKDC-206ENST00000536429 DEAF1O75398 565 aaPredicted RBP11.19□□□□□ -0.62
PRKDC-206ENST00000536429 IFNGP01579 166 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 TACSTD2P09758 323 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 ACSM4P0C7M7 580 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 ZNF823P16415 610 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 ZNF23P17027 643 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 ZNF3P17036 446 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 DAPP51397 102 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 ATP6AP1Q15904 470 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 Q6ZR03 302 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 USP51Q70EK9 711 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 C1orf174Q8IYL3 243 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 ATG16L2Q8NAA4 619 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 ZNF540Q8NDQ6 660 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 OR6K6Q8NGW6 343 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 OR2AJ1Q8NGZ0 328 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 OTULINQ96BN8 352 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 ATF6BQ99941 703 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 MMADHCQ9H3L0 296 aaPredicted RBP11.19□□□□□ -0.62
PRKDC-206ENST00000536429 NARFLQ9H6Q4 476 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 CHODLQ9H9P2 273 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 NKIRAS2Q9NYR9 191 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 TREM2Q9NZC2 230 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 GPR160Q9UJ42 338 aa11.19□□□□□ -0.62
PRKDC-206ENST00000536429 PLSCR5A0PG75 271 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 SURF4O15260 269 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 MITFO75030 526 aaPredicted RBP11.18□□□□□ -0.62
PRKDC-206ENST00000536429 SPARCP09486 303 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 ANXA8P13928 327 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 KITLGP21583 273 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 ACHEP22303 614 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 FMO3P31513 532 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 GPR6P46095 362 aaPredicted RBP11.18□□□□□ -0.62
PRKDC-206ENST00000536429 ENTPD1P49961 510 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 PPP2R2BQ00005 443 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 CDK5Q00535 292 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 MOGQ16653 247 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 PCK2Q16822 640 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms