RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 UBE2NLQ5JXB2 153 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 PRAMEF8Q5VWM4 474 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 PRAMEF7Q5VXH5 474 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 WSCD1Q658N2 575 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 LEMD1Q68G75 181 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 BTNL8Q6UX41 500 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 GALNTL5Q7Z4T8 443 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 COMMD1Q8N668 190 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 PNLDC1Q8NA58 520 aaKnown RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 OR5M8Q8NGP6 311 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ZNF563Q8TA94 476 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 SFXN5Q8TD22 340 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 RHBDD1Q8TEB9 315 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ZG16BQ96DA0 208 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 NOL4LQ96MY1 436 aaPredicted RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 GNRHR2Q96P88 292 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 OR6C1Q96RD1 312 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 GINS3Q9BRX5 216 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 RNF126Q9BV68 326 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ZDHHC5Q9C0B5 715 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ARL15Q9NXU5 204 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 PLA2G3Q9NZ20 509 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ZNF581Q9P0T4 197 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 SLC7A7Q9UM01 511 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 TMED7Q9Y3B3 224 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 PAM16Q9Y3D7 125 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 GTF3C1Q12789 2109 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 TRIP12Q14669 1992 aaPredicted RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 A0A0D9SEW6 157 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 SMIM35A0A1B0GVV1 85 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 A0A1W2PPQ1 181 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 C20orf202A1L168 122 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 PRAMEF27A3QJZ7 478 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 TRAPPC13A5PLN9 417 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 TMEM8BA6NDV4 472 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 TMEM210A6NLX4 147 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 FAM171A2A8MVW0 826 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 RPL36A-HNRNPH2H7BZ11 118 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 CDC42EP2O14613 210 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ADAM10O14672 748 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ITGB1BP1O14713 200 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 OGG1O15527 345 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 CDC14BO60729 498 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ZNF354AO60765 605 aaPredicted RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 CTNSO60931 367 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 NSA2O95478 260 aaKnown RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 EPPINO95925 133 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 PLGP00747 810 aaPredicted RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 LCATP04180 440 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 AMY2AP04746 511 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ANXA5P08758 320 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 LAMP2P13473 410 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 HOXB2P14652 356 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 IL9P15248 144 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 SERPINA2P20848 420 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 PRPS1L1P21108 318 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 FUT3P21217 361 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 LMO1P25800 156 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 AGTR1P30556 359 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 IFNGR2P38484 337 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 BUD31P41223 144 aaPredicted RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 NKX2-1P43699 371 aaPredicted RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 GABRA4P48169 554 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 LSSP48449 732 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 DVL1P1P54792 670 aaPredicted RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 UCP2P55851 309 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 CLDN17P56750 224 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 CCL20P78556 96 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 BDH1Q02338 343 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 LMAN2Q12907 356 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 GAGE1Q13065 139 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 CRMP1Q14194 572 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 SLC9A3R2Q15599 337 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 TCEAL5Q5H9L2 206 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 PRAMEF20Q5VT98 475 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 FAHD2BQ6P2I3 314 aaPredicted RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 UNQ5815/PRO19632Q6UWF5 114 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 IL34Q6ZMJ4 242 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 GAREM2Q75VX8 874 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 MTSS1LQ765P7 747 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 PLPPR4Q7Z2D5 763 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 CATSPERDQ86XM0 798 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 MRPL41Q8IXM3 137 aaKnown RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 ACBD7Q8N6N7 88 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 STPG4Q8N801 248 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 PIGXQ8TBF5 258 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ZBTB8AQ96BR9 441 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 RAB39BQ96DA2 213 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 SDSLQ96GA7 329 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 FAHD2AQ96GK7 314 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ADGRG7Q96K78 797 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 TP53RKQ96S44 253 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 RNF2Q99496 336 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 NRTNQ99748 197 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 C16orf70Q9BSU1 422 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ABHD14AQ9BUJ0 271 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ADGRE3Q9BY15 652 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 GPR87Q9BY21 358 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 OR2J1Q9GZK6 312 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 CST11Q9H112 138 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms