RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 PRSS16Q9NQE7 514 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 TMEM100Q9NV29 134 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 CKLFQ9UBR5 152 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 DKK4Q9UBT3 224 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 MIOXQ9UGB7 285 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 OR5V1Q9UGF6 321 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 CD84Q9UIB8 345 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 MOKQ9UQ07 419 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 ASF1AQ9Y294 204 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 DTX4Q9Y2E6 619 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.91□□□□□ -1.46
USP28-202ENST00000535607 MEMO1Q9Y316 297 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 WDR45Q9Y484 360 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 TMEM14AQ9Y6G1 99 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 MYO9BQ13459 2157 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 BRWD1Q9NSI6 2320 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 DOCK6Q96HP0 2047 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 NINQ8N4C6 2090 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 A0A087WV62 115 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 A0A0A6YYD5 115 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 TEX13DA0A0J9YY54 714 aaPredicted RBP5.9□□□□□ -1.46
USP28-202ENST00000535607 A0A1B0GTI1 187 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 TSPAN11A1L157 253 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 ARGFXA6NJG6 315 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 TMEM212A6NML5 194 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 ZNF705EA8MWA4 302 aaPredicted RBP5.9□□□□□ -1.46
USP28-202ENST00000535607 C2CD4DB7Z1M9 353 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 F8VVB4 439 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 F8VWA3 439 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 NPIPB9F8W1W9 429 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 AP4M1O00189 453 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 ZNF208O43345 1280 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 OR1F1O43749 312 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 OR2T1O43869 369 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 ERAL1O75616 437 aaKnown RBP5.9□□□□□ -1.46
USP28-202ENST00000535607 NDUFB2O95178 105 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 SLC2A10O95528 541 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 ONECUT2O95948 504 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 F10P00742 488 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 GLAP06280 429 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 ACAA1P09110 424 aaPredicted RBP5.9□□□□□ -1.46
USP28-202ENST00000535607 SLC2A1P11166 492 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 TBPP20226 339 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 SLC2A5P22732 501 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 MST1P26927 711 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 TACR3P29371 465 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 GDI1P31150 447 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 KCNJ3P48549 501 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 CENPAP49450 140 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 DIO1P49895 249 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 CAV2P51636 162 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 STXBP1P61764 594 aaKnown RBP5.9□□□□□ -1.46
USP28-202ENST00000535607 LMAN2Q12907 356 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 KCNAB1Q14722 419 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 FAM189A2Q15884 450 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 RAB11BQ15907 218 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 ALG11Q2TAA5 492 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 CCSMST1Q4G0I0 132 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 TMEM244Q5VVB8 128 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 FCRL6Q6DN72 434 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 MTFR2Q6P444 385 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 TMEM71Q6P5X7 295 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 ZCCHC12Q6PEW1 402 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 PARM1Q6UWI2 310 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 TMPRSS12Q86WS5 348 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 VRK2Q86Y07 508 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 NRROSQ86YC3 692 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 TMEM25Q86YD3 366 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 CBLN2Q8IUK8 224 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 ZNF619Q8N2I2 560 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 SDR9C7Q8NEX9 313 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 OR4K17Q8NGC6 315 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 OR4D9Q8NGE8 314 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 OR51S1Q8NGJ8 323 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 OR52B4Q8NGK2 314 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 OR1S2Q8NGQ3 325 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 OR2L2Q8NH16 312 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 MAFAQ8NHW3 353 aaPredicted RBP5.9□□□□□ -1.46
USP28-202ENST00000535607 DUSP19Q8WTR2 217 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 ABHD5Q8WTS1 349 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 NUDCD2Q8WVJ2 157 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 ASB10Q8WXI3 467 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 RSC1A1Q92681 617 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 CDS1Q92903 461 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 CPNE4Q96A23 557 aaPredicted RBP5.9□□□□□ -1.46
USP28-202ENST00000535607 LMLNQ96KR4 655 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 LRRC3BQ96PB8 259 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 OR1F2PQ96R84 312 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 TIMP4Q99727 224 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 CMSS1Q9BQ75 279 aaKnown RBP5.9□□□□□ -1.46
USP28-202ENST00000535607 TRIM2Q9C040 744 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 MED20Q9H944 212 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 RXFP3Q9NSD7 469 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 DEC1Q9P2X7 70 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 LPAR3Q9UBY5 353 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 ZNF223Q9UK11 482 aaPredicted RBP5.9□□□□□ -1.46
USP28-202ENST00000535607 SIGLEC7Q9Y286 467 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 OR10H1Q9Y4A9 318 aa5.9□□□□□ -1.46
USP28-202ENST00000535607 UNC80Q8N2C7 3258 aa5.9□□□□□ -1.47
USP28-202ENST00000535607 TRAV18A0A075B6X5 111 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms