RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 ATRQ13535 2644 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 C5orf49A4QMS7 147 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 PRODHO43272 600 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 ICMTO60725 284 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 LY6G6DO95868 133 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 CLPTM1O96005 669 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 HLA-DQA2P01906 255 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 TTKP33981 857 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 RBMXP38159 391 aaKnown RBP11.25□□□□□ -0.61
CHFR-210ENST00000535527 MPV17P39210 176 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 SCRN3Q0VDG4 424 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 SWI5Q1ZZU3 235 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 ALKBH6Q3KRA9 238 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 ELFN2Q5R3F8 820 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 SPATA46Q5T0L3 261 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 SPATC1Q76KD6 591 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 SHFQ7M4L6 423 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 SSX6Q7RTT6 188 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 DPY19L4Q7Z388 723 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 DCXRQ7Z4W1 244 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 DPPA2Q7Z7J5 298 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 ENTHD1Q8IYW4 607 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 OR6N2Q8NGY6 317 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 OR1F12Q8NHA8 337 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 ZNF582Q96NG8 517 aaPredicted RBP11.25□□□□□ -0.61
CHFR-210ENST00000535527 ADGRL4Q9HBW9 690 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 BEX4Q9NWD9 120 aaPredicted RBP11.25□□□□□ -0.61
CHFR-210ENST00000535527 FAM118AQ9NWS6 357 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 POU2F3Q9UKI9 436 aa11.25□□□□□ -0.61
CHFR-210ENST00000535527 ZNF593O00488 134 aaPredicted RBP11.24□□□□□ -0.61
CHFR-210ENST00000535527 MAGEB4O15481 346 aaPredicted RBP11.24□□□□□ -0.61
CHFR-210ENST00000535527 CCNOP22674 350 aa11.24□□□□□ -0.61
CHFR-210ENST00000535527 FMO3P31513 532 aa11.24□□□□□ -0.61
CHFR-210ENST00000535527 OTX1P32242 354 aaPredicted RBP11.24□□□□□ -0.61
CHFR-210ENST00000535527 ADARB1P78563 741 aaKnown RBP11.24□□□□□ -0.61
CHFR-210ENST00000535527 GGTLC2Q14390 218 aa11.24□□□□□ -0.61
CHFR-210ENST00000535527 MAD2L1BPQ15013 274 aaPredicted RBP11.24□□□□□ -0.61
CHFR-210ENST00000535527 TBC1D28Q2M2D7 210 aa11.24□□□□□ -0.61
CHFR-210ENST00000535527 TEX30Q5JUR7 227 aa11.24□□□□□ -0.61
CHFR-210ENST00000535527 NXNL2Q5VZ03 156 aa11.24□□□□□ -0.61
CHFR-210ENST00000535527 LAIR2Q6ISS4 152 aa11.24□□□□□ -0.61
CHFR-210ENST00000535527 C20orf204Q6ZNR8 217 aa11.24□□□□□ -0.61
CHFR-210ENST00000535527 INTS14Q96SY0 518 aa11.24□□□□□ -0.61
CHFR-210ENST00000535527 TEAD3Q99594 435 aa11.24□□□□□ -0.61
CHFR-210ENST00000535527 CCL19Q99731 98 aa11.24□□□□□ -0.61
CHFR-210ENST00000535527 ABHD6Q9BV23 337 aa11.24□□□□□ -0.61
CHFR-210ENST00000535527 ZNF442Q9H7R0 627 aa11.24□□□□□ -0.61
CHFR-210ENST00000535527 CDH20Q9HBT6 801 aa11.24□□□□□ -0.61
CHFR-210ENST00000535527 DDX28Q9NUL7 540 aaKnown RBP11.24□□□□□ -0.61
CHFR-210ENST00000535527 SMPD3Q9NY59 655 aaPredicted RBP11.24□□□□□ -0.61
CHFR-210ENST00000535527 FBXL3Q9UKT7 428 aa11.24□□□□□ -0.61
CHFR-210ENST00000535527 IQCMA0A1B0GVH7 501 aa11.23□□□□□ -0.61
CHFR-210ENST00000535527 ENTPD6O75354 484 aa11.23□□□□□ -0.61
CHFR-210ENST00000535527 WBP4O75554 376 aaKnown RBP11.23□□□□□ -0.61
CHFR-210ENST00000535527 LY6HO94772 140 aa11.23□□□□□ -0.61
CHFR-210ENST00000535527 GNAO1P09471 354 aa11.23□□□□□ -0.61
CHFR-210ENST00000535527 OR4A8P0C604 315 aa11.23□□□□□ -0.61
CHFR-210ENST00000535527 ACSM4P0C7M7 580 aa11.23□□□□□ -0.61
CHFR-210ENST00000535527 COX5BP10606 129 aa11.23□□□□□ -0.61
CHFR-210ENST00000535527 APLNRP35414 380 aa11.23□□□□□ -0.61
CHFR-210ENST00000535527 FABP6P51161 128 aa11.23□□□□□ -0.61
CHFR-210ENST00000535527 RAD23AP54725 363 aa11.23□□□□□ -0.61
CHFR-210ENST00000535527 PCBD1P61457 104 aa11.23□□□□□ -0.61
CHFR-210ENST00000535527 SMN1Q16637 294 aaKnown RBP11.23□□□□□ -0.61
CHFR-210ENST00000535527 ZCCHC24Q8N2G6 241 aaKnown RBP11.23□□□□□ -0.61
CHFR-210ENST00000535527 MUC15Q8N387 334 aa11.23□□□□□ -0.61
CHFR-210ENST00000535527 OR10H5Q8NGA6 315 aa11.23□□□□□ -0.61
CHFR-210ENST00000535527 IPCEF1Q8WWN9 437 aaPredicted RBP11.23□□□□□ -0.61
CHFR-210ENST00000535527 MRPL24Q96A35 216 aaKnown RBP11.23□□□□□ -0.61
CHFR-210ENST00000535527 SLAMF6Q96DU3 332 aa11.23□□□□□ -0.61
CHFR-210ENST00000535527 MARS2Q96GW9 593 aaKnown RBP11.23□□□□□ -0.61
CHFR-210ENST00000535527 PLEKHA8Q96JA3 519 aa11.23□□□□□ -0.61
CHFR-210ENST00000535527 COQ7Q99807 217 aa11.23□□□□□ -0.61
CHFR-210ENST00000535527 SYT3Q9BQG1 590 aa11.23□□□□□ -0.61
CHFR-210ENST00000535527 RHNO1Q9BSD3 238 aa11.23□□□□□ -0.61
CHFR-210ENST00000535527 DCLRE1BQ9H816 532 aa11.23□□□□□ -0.61
CHFR-210ENST00000535527 ZNF319Q9P2F9 582 aa11.23□□□□□ -0.61
CHFR-210ENST00000535527 YLPM1P49750 1951 aaKnown RBP11.23□□□□□ -0.61
CHFR-210ENST00000535527 HIVEP2P31629 2446 aa11.23□□□□□ -0.61
CHFR-210ENST00000535527 SLC16A6O15403 523 aa11.22□□□□□ -0.61
CHFR-210ENST00000535527 LILRA1O75019 489 aa11.22□□□□□ -0.61
CHFR-210ENST00000535527 IGHV4-39P01824 125 aa11.22□□□□□ -0.61
CHFR-210ENST00000535527 SLC2A1P11166 492 aa11.22□□□□□ -0.61
CHFR-210ENST00000535527 ALOX5APP20292 161 aa11.22□□□□□ -0.61
CHFR-210ENST00000535527 PAICSP22234 425 aaKnown RBP11.22□□□□□ -0.61
CHFR-210ENST00000535527 APOBEC3AP31941 199 aaPredicted RBP11.22□□□□□ -0.61
CHFR-210ENST00000535527 GLRXP35754 106 aa11.22□□□□□ -0.61
CHFR-210ENST00000535527 GDI2P50395 445 aaKnown RBP11.22□□□□□ -0.61
CHFR-210ENST00000535527 NUDT6P53370 316 aa11.22□□□□□ -0.61
CHFR-210ENST00000535527 AQP4P55087 323 aa11.22□□□□□ -0.61
CHFR-210ENST00000535527 UCP2P55851 309 aa11.22□□□□□ -0.61
CHFR-210ENST00000535527 RPS7P62081 194 aaKnown RBP11.22□□□□□ -0.61
CHFR-210ENST00000535527 PLP2Q04941 152 aa11.22□□□□□ -0.61
CHFR-210ENST00000535527 SLC34A1Q06495 639 aa11.22□□□□□ -0.61
CHFR-210ENST00000535527 EIF2B1Q14232 305 aaKnown RBP11.22□□□□□ -0.61
CHFR-210ENST00000535527 SNAI3Q3KNW1 292 aa11.22□□□□□ -0.61
CHFR-210ENST00000535527 SPRNQ5BIV9 151 aa11.22□□□□□ -0.61
CHFR-210ENST00000535527 SLC35D3Q5M8T2 416 aa11.22□□□□□ -0.61
CHFR-210ENST00000535527 ZNF544Q6NX49 715 aa11.22□□□□□ -0.61
CHFR-210ENST00000535527 COLCA1Q6ZS62 124 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms