RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 GUCY1A3Q02108 690 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 FMODQ06828 376 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 MAD2L1Q13257 205 aaPredicted RBP6.72□□□□□ -1.33
CLIP1-206ENST00000535290 MAB21L1Q13394 359 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 MPPED2Q15777 294 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 NXNQ6DKJ4 435 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 RANBP3LQ86VV4 465 aaPredicted RBP6.72□□□□□ -1.33
CLIP1-206ENST00000535290 Q8N2B8 174 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 TRIML2Q8N7C3 387 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 Q8N7P7 452 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 BOLLQ8N9W6 283 aaKnown RBP6.72□□□□□ -1.33
CLIP1-206ENST00000535290 Q8TCH9 128 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 SLC7A13Q8TCU3 470 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 TNFRSF14Q92956 283 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 PTP4A1Q93096 173 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 AJUBAQ96IF1 538 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 WFDC6Q9BQY6 131 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 PCDHAC1Q9H158 963 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 TUBG2Q9NRH3 451 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 UFSP2Q9NUQ7 469 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 ONECUT1Q9UBC0 465 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 LSM4Q9Y4Z0 139 aaKnown RBP6.72□□□□□ -1.33
CLIP1-206ENST00000535290 RYR1P21817 5038 aa6.71□□□□□ -1.33
CLIP1-206ENST00000535290 TLDC2A0PJX2 215 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 WDR91A4D1P6 747 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 RBMY1BA6NDE4 496 aaKnown RBP6.71□□□□□ -1.34
CLIP1-206ENST00000535290 RBMY1EA6NEQ0 496 aaKnown RBP6.71□□□□□ -1.34
CLIP1-206ENST00000535290 E9PBE3 544 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 LGALS8O00214 317 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 TPST1O60507 370 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 TPST2O60704 377 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 ECDO95905 644 aaPredicted RBP6.71□□□□□ -1.34
CLIP1-206ENST00000535290 RBMY1DP0C7P1 496 aaKnown RBP6.71□□□□□ -1.34
CLIP1-206ENST00000535290 RAC2P15153 192 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 ACADSP16219 412 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 ECHS1P30084 290 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 HTR5AP47898 357 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 CCT5P48643 541 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 BMXP51813 675 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 CDH12P55289 794 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 DSTNP60981 165 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 OR1Q1Q15612 314 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 ZNF74Q16587 644 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 TCTEX1D4Q5JR98 221 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 PRAMEF6Q5VXH4 476 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 C1orf94Q6P1W5 598 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 KRT77Q7Z794 578 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 LY6G5BQ8NDX9 201 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 BHLHE23Q8NDY6 225 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 Q8NFD4 153 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 OR11L1Q8NGX0 322 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 PIFOQ8TCI5 191 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 DPF1Q92782 380 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 PPP1R36Q96LQ0 422 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 ZNF582Q96NG8 517 aaPredicted RBP6.71□□□□□ -1.34
CLIP1-206ENST00000535290 DCTN5Q9BTE1 182 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 TMEM43Q9BTV4 400 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 FAM234AQ9H0X4 552 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 AKTIPQ9H8T0 292 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 CACYBPQ9HB71 228 aaKnown RBP6.71□□□□□ -1.34
CLIP1-206ENST00000535290 RAB18Q9NP72 206 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 SELENONQ9NZV5 590 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 LYSTQ99698 3801 aa6.71□□□□□ -1.34
CLIP1-206ENST00000535290 A0A1B0GW55 424 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 FBP2O00757 339 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 KRT75O95678 551 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 GYPAP02724 150 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 ABHD2P08910 425 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 CST2P09228 141 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 DUX4L2P0CJ85 424 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 DUX4L3P0CJ86 424 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 DUX4L4P0CJ87 422 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 DUX4L5P0CJ88 424 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 DUX4L6P0CJ89 424 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 DUX4L7P0CJ90 424 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 ALDH3A1P30838 453 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 RAD23AP54725 363 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 NME5P56597 212 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 ELF3P78545 371 aaPredicted RBP6.7□□□□□ -1.34
CLIP1-206ENST00000535290 ENDOGQ14249 297 aaKnown RBP6.7□□□□□ -1.34
CLIP1-206ENST00000535290 OR8B8Q15620 311 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 KCNJ8Q15842 424 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 LRRC75BQ2VPJ9 315 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 TMEM95Q3KNT9 176 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 SLC25A47Q6Q0C1 308 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 DUX4L9Q6RFH8 374 aaPredicted RBP6.7□□□□□ -1.34
CLIP1-206ENST00000535290 Q6ZS46 218 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 CCDC121Q6ZUS5 278 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 CLDN22Q8N7P3 220 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 LINC00482Q8N8I6 264 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 DTX3Q8N9I9 347 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 OR51G2Q8NGK0 314 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 C8orf46Q8TAG6 207 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 ASB10Q8WXI3 467 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 ST8SIA4Q92187 359 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 SLC7A6Q92536 515 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 TFAP2CQ92754 450 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 HDAC2Q92769 488 aaKnown RBP6.7□□□□□ -1.34
CLIP1-206ENST00000535290 MAL2Q969L2 176 aa6.7□□□□□ -1.34
CLIP1-206ENST00000535290 FMO2Q99518 471 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms