RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 HLXQ14774 488 aaPredicted RBP7.52□□□□□ -1.21
COPB1-211ENST00000534234 MEP1BQ16820 701 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 HIST2H3PS2Q5TEC6 136 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 DNM1P34Q6PK57 102 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 C12orf54Q6X4T0 127 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 USP43Q70EL4 1123 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 HIST2H3AQ71DI3 136 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 C1QL2Q7Z5L3 287 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 LRRC28Q86X40 367 aaPredicted RBP7.52□□□□□ -1.21
COPB1-211ENST00000534234 OR5AS1Q8N127 324 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 KLHL36Q8N4N3 616 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 ATG16L2Q8NAA4 619 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 OR4K13Q8NH42 304 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 ITLN1Q8WWA0 313 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 MCUR1Q96AQ8 359 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 CDRT15Q96T59 188 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 NMNAT3Q96T66 252 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 OR52D1Q9H346 318 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 ATPIF1Q9UII2 106 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 B9D1Q9UPM9 204 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 IGLV1-36A0A0B4J1U3 117 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 ARPC3O15145 178 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 FOXH1O75593 365 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 NOS3P29474 1203 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 SLC6A6P31641 620 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 HILS1P60008 231 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 SPIBQ01892 262 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 DBPQ10586 325 aaPredicted RBP7.51□□□□□ -1.21
COPB1-211ENST00000534234 OR2T2Q6IF00 324 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 SLC27A4Q6P1M0 643 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 LEG1Q6P5S2 330 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 PGM2L1Q6PCE3 622 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 CORO6Q6QEF8 472 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 FBXW12Q6X9E4 464 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 JAZF1Q86VZ6 243 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 OR6V1Q8N148 313 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 SPICQ8N5J4 248 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 ZNF283Q8N7M2 679 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 SEMA6DQ8NFY4 1073 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 OR13G1Q8NGZ3 307 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 APOBEC3DQ96AK3 386 aaPredicted RBP7.51□□□□□ -1.21
COPB1-211ENST00000534234 NSMCE2Q96MF7 247 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 ZNF582Q96NG8 517 aaPredicted RBP7.51□□□□□ -1.21
COPB1-211ENST00000534234 OR2V2Q96R30 315 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 IFT27Q9BW83 186 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 CDADC1Q9BWV3 514 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 NSRP1Q9H0G5 558 aaKnown RBP7.51□□□□□ -1.21
COPB1-211ENST00000534234 PATZ1Q9HBE1 687 aaKnown RBP7.51□□□□□ -1.21
COPB1-211ENST00000534234 PTTG3PQ9NZH4 202 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 CD300AQ9UGN4 299 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 OPN4Q9UHM6 478 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 MAGEL2Q9UJ55 1249 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 TMCC3Q9ULS5 477 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 LHFPL6Q9Y693 200 aa7.51□□□□□ -1.21
COPB1-211ENST00000534234 PPIAL4EA0A075B759 164 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 PPIAL4CA0A0B4J2A2 164 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 PPIAL4DF5H284 164 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 TRIM77I1YAP6 450 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 RENP00797 406 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 SEMG1P04279 462 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 FABP3P05413 133 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 PPIAL4FP0DN26 164 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 HIST1H1CP16403 213 aaKnown RBP7.5□□□□□ -1.21
COPB1-211ENST00000534234 FPR3P25089 353 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 FPR2P25090 351 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 IFNGR2P38484 337 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 SLC6A9P48067 706 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 BTG1P62324 171 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 COX10Q12887 443 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 ZMYND11Q15326 602 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 RSPO1Q2MKA7 263 aaPredicted RBP7.5□□□□□ -1.21
COPB1-211ENST00000534234 TMEM155Q4W5P6 130 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 SAMD4BQ5PRF9 694 aaKnown RBP7.5□□□□□ -1.21
COPB1-211ENST00000534234 PGAM4Q8N0Y7 254 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 SLC26A10Q8NG04 563 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 OR8G5Q8NG78 346 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 OR2AJ1Q8NGZ0 328 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 FANK1Q8TC84 345 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 C22orf15Q8WYQ4 148 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 SIGLEC11Q96RL6 698 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 JMJD8Q96S16 334 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 COQ7Q99807 217 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 SUCNR1Q9BXA5 334 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 HDHD2Q9H0R4 259 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 GCM1Q9NP62 436 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 IL1RAPQ9NPH3 570 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 RPRD1BQ9NQG5 326 aaKnown RBP7.5□□□□□ -1.21
COPB1-211ENST00000534234 MMP26Q9NRE1 261 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 OR6C68A6NDL8 312 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 F5H5K5 113 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 H0YL77 283 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 TRAPPC2LH3BP13 241 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 TMEM178BH3BS89 294 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 ARPC2O15144 300 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 IDH3BO43837 385 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 HLA-DQA2P01906 255 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 RRM2P31350 389 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 MDH2P40926 338 aaKnown RBP7.5□□□□□ -1.21
COPB1-211ENST00000534234 SRP9P49458 86 aaKnown RBP7.5□□□□□ -1.21
COPB1-211ENST00000534234 ACTG1P63261 375 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms