RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 CRMP1Q14194 572 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 ENDOGQ14249 297 aaKnown RBP7.46□□□□□ -1.22
COPB1-210ENST00000533533 GINS1Q14691 196 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 TMEM236Q5W0B7 351 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 SLC27A4Q6P1M0 643 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 TMEM154Q6P9G4 183 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 CD300LDQ6UXZ3 194 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 FOXL2NBQ6ZUU3 175 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 ZNF584Q8IVC4 421 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 C10orf67Q8IYJ2 551 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 LNX2Q8N448 690 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 NPEPL1Q8NDH3 523 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 CPEB3Q8NE35 698 aaKnown RBP7.46□□□□□ -1.22
COPB1-210ENST00000533533 OR6K6Q8NGW6 343 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 OR2AJ1Q8NGZ0 328 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 OR2T4Q8NH00 348 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 ZFAND2BQ8WV99 257 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 NRBF2Q96F24 287 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 ZNF75AQ96N20 296 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 WNT5BQ9H1J7 359 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 MED20Q9H944 212 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 DYNLRB1Q9NP97 96 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 KRT84Q9NSB2 600 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 PLEK2Q9NYT0 353 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 ASH2LQ9UBL3 628 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 EIF3KQ9UBQ5 218 aaKnown RBP7.46□□□□□ -1.22
COPB1-210ENST00000533533 REV1Q9UBZ9 1251 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 DUSP13Q9UII6 198 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 CMAHPQ9Y471 501 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 NOTCH1P46531 2555 aa7.46□□□□□ -1.22
COPB1-210ENST00000533533 WNK1Q9H4A3 2382 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 IGLV1-36A0A0B4J1U3 117 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 FAM183AA6NL82 134 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 B4DSR2 109 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 LYNX1G3V0Z9 82 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 SGCEO43556 437 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 MITFO75030 526 aaPredicted RBP7.45□□□□□ -1.22
COPB1-210ENST00000533533 BAG2O95816 211 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 ADRA2AP08913 450 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 LYNX1P0DP58 116 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 ZNF35P13682 527 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 PAICSP22234 425 aaKnown RBP7.45□□□□□ -1.22
COPB1-210ENST00000533533 NR4A1P22736 598 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 GRK5P34947 590 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 DAPP51397 102 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 RPS23P62266 143 aaKnown RBP7.45□□□□□ -1.22
COPB1-210ENST00000533533 TEKQ02763 1124 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 AQP6Q13520 282 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 KLHL12Q53G59 568 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 RGS7BPQ6MZT1 257 aaPredicted RBP7.45□□□□□ -1.22
COPB1-210ENST00000533533 ACSM5Q6NUN0 579 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 ZFP1Q6P2D0 407 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 CORO6Q6QEF8 472 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 LINC00346Q8IVM7 164 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 PAQR4Q8N4S7 273 aaPredicted RBP7.45□□□□□ -1.22
COPB1-210ENST00000533533 SEMA6DQ8NFY4 1073 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 OR1J1Q8NGS3 322 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 STMN2Q93045 179 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 DUS3LQ96G46 650 aaKnown RBP7.45□□□□□ -1.22
COPB1-210ENST00000533533 CENPNQ96H22 339 aaPredicted RBP7.45□□□□□ -1.22
COPB1-210ENST00000533533 PKP2Q99959 881 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 SYT3Q9BQG1 590 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 RACGAP1Q9H0H5 632 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 OR51V1Q9H2C8 321 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 METTL17Q9H7H0 456 aaPredicted RBP7.45□□□□□ -1.22
COPB1-210ENST00000533533 TVP23BQ9NYZ1 205 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 NDRG4Q9ULP0 352 aaKnown RBP7.45□□□□□ -1.22
COPB1-210ENST00000533533 OAZ3Q9UMX2 235 aa7.45□□□□□ -1.22
COPB1-210ENST00000533533 TRRAPQ9Y4A5 3859 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 A0A1W2PPW3 197 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 ANKRD65E5RJM6 399 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 PRR23D1E9PI22 279 aaPredicted RBP7.44□□□□□ -1.22
COPB1-210ENST00000533533 RER1O15258 196 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 ABHD16AO95870 558 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 TFP02787 698 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 HMGN1P05114 100 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 SPARCP09486 303 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 PRR23D2P0DMB1 279 aaPredicted RBP7.44□□□□□ -1.22
COPB1-210ENST00000533533 GAAP10253 952 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 CLUP10909 449 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 SPI1P17947 270 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 FMO3P31513 532 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 GLRXP35754 106 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 RAD52P43351 418 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 EVX1P49640 407 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 COMPP49747 757 aaPredicted RBP7.44□□□□□ -1.22
COPB1-210ENST00000533533 CRISP1P54107 249 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 UCP2P55851 309 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 SELENOVP59797 346 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 ERVS71-1P61550 626 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 RPS7P62081 194 aaKnown RBP7.44□□□□□ -1.22
COPB1-210ENST00000533533 LSM6P62312 80 aaKnown RBP7.44□□□□□ -1.22
COPB1-210ENST00000533533 SNAPC1Q16533 368 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 ZSCAN26Q16670 478 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 ALKBH6Q3KRA9 238 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 SPATA46Q5T0L3 261 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 PLBD1Q6P4A8 553 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 FAHD1Q6P587 224 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 ARL9Q6T311 187 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 UNQ6126/PRO20091Q6UXV3 157 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms