RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 MANEAQ5SRI9 462 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 MRPL21Q7Z2W9 205 aaKnown RBP11.11□□□□□ -0.63
BDNF-218ENST00000533246 OR10D4PQ8NGN7 298 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 FCRL1Q96LA6 429 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 DUSP23Q9BVJ7 150 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 SMCO4Q9NRQ5 59 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 NRXN2Q9P2S2 1712 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 ZNF729A6NN14 1252 aaPredicted RBP11.11□□□□□ -0.63
BDNF-218ENST00000533246 PI3P19957 117 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 POU3F2P20265 443 aaPredicted RBP11.11□□□□□ -0.63
BDNF-218ENST00000533246 FOXL2P58012 376 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 TAS2R60P59551 318 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 PPA1Q15181 289 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 EXOSC6Q5RKV6 272 aaKnown RBP11.11□□□□□ -0.63
BDNF-218ENST00000533246 NCMAPQ5T1S8 102 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 SEZ6L2Q6UXD5 910 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 CMTM4Q8IZR5 234 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 BHLHE23Q8NDY6 225 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 STEAP2Q8NFT2 490 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 ARL11Q969Q4 196 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 SPSB2Q99619 263 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 LRRC61Q9BV99 259 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 TMEM59Q9BXS4 323 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 EVA1AQ9H8M9 152 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 BCO1Q9HAY6 547 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 GAR1Q9NY12 217 aaKnown RBP11.11□□□□□ -0.63
BDNF-218ENST00000533246 ZNF638Q14966 1978 aaKnown RBP11.11□□□□□ -0.63
BDNF-218ENST00000533246 PPP1R2P9O14990 202 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 GPR37O15354 613 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 LILRB5O75023 590 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 BDKRB2P30411 391 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 PPICP45877 212 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 CAPZBP47756 277 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 HTR5AP47898 357 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 ZFP36L2P47974 494 aaKnown RBP11.11□□□□□ -0.63
BDNF-218ENST00000533246 C12orf73Q69YU5 71 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 SLC16A9Q7RTY1 509 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 ASB17Q8WXJ9 295 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 CPNE4Q96A23 557 aaPredicted RBP11.11□□□□□ -0.63
BDNF-218ENST00000533246 TMEM43Q9BTV4 400 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 RNF32Q9H0A6 362 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 OR52A1Q9UKL2 312 aa11.11□□□□□ -0.63
BDNF-218ENST00000533246 IGHV5-51A0A0C4DH38 117 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 GPR31O00270 319 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 CPT2P23786 658 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 ZNF93P35789 620 aaPredicted RBP11.1□□□□□ -0.63
BDNF-218ENST00000533246 P2RY4P51582 365 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 HMGA2P52926 109 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 DUSP2Q05923 314 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 CDK5R1Q15078 307 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 LANCL3Q6ZV70 420 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.1□□□□□ -0.63
BDNF-218ENST00000533246 TMEM200AQ86VY9 491 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 C9orf62Q8N4C0 152 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 ARIH2OSQ8N7S6 290 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 PAQR8Q8TEZ7 354 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 NINJ1Q92982 152 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 KTI12Q96EK9 354 aaPredicted RBP11.1□□□□□ -0.63
BDNF-218ENST00000533246 SCMH1Q96GD3 660 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 SLC52A3Q9NQ40 469 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 TAS2R4Q9NYW5 299 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 PLEKHB1Q9UF11 243 aaPredicted RBP11.1□□□□□ -0.63
BDNF-218ENST00000533246 SIGLEC7Q9Y286 467 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 BORCS7-ASMTA0A0B4J1R7 106 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 TSPAN11A1L157 253 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 DNAJB6O75190 326 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 IGHA2P01877 340 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 ZNF44P15621 663 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 CRYBB2P43320 205 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 UBE2NP61088 152 aaKnown RBP11.1□□□□□ -0.63
BDNF-218ENST00000533246 RPL27P61353 136 aaKnown RBP11.1□□□□□ -0.63
BDNF-218ENST00000533246 MFAP5Q13361 173 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 UNQ6126/PRO20091Q6UXV3 157 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 H1FNTQ75WM6 255 aaPredicted RBP11.1□□□□□ -0.63
BDNF-218ENST00000533246 AAED1Q7RTV5 226 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 SLC16A14Q7RTX9 510 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 GRINAQ7Z429 371 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 ZAR1Q86SH2 424 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 YRDCQ86U90 279 aaKnown RBP11.1□□□□□ -0.63
BDNF-218ENST00000533246 FAM71CQ8NEG0 241 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 C17orf47Q8NEP4 570 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 OR1J4Q8NGS1 313 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 COX14Q96I36 57 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 GPA33Q99795 319 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 MRI1Q9BV20 369 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 CHRNA9Q9UGM1 479 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 MMACHCQ9Y4U1 282 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 HRKO00198 91 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 PET100P0DJ07 73 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 PRF1P14222 555 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 S100A11P31949 105 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 DCTDP32321 178 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 TSPAN7P41732 249 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 UBE2IP63279 158 aaKnown RBP11.1□□□□□ -0.63
BDNF-218ENST00000533246 PLEKHN1Q494U1 663 aaPredicted RBP11.1□□□□□ -0.63
BDNF-218ENST00000533246 MOB3CQ70IA8 216 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 SSX7Q7RTT5 188 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 OR4K15Q8NH41 348 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 PRRT1Q99946 306 aa11.1□□□□□ -0.63
BDNF-218ENST00000533246 PHF7Q9BWX1 381 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms