RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 MRPS34P82930 218 aaKnown RBP13.43□□□□□ -0.26
PCDHA9-202ENST00000532602 OR51F2Q8NH61 342 aa13.43□□□□□ -0.26
PCDHA9-202ENST00000532602 OR2AE1Q8NHA4 323 aa13.43□□□□□ -0.26
PCDHA9-202ENST00000532602 OR2V1Q8NHB1 315 aa13.43□□□□□ -0.26
PCDHA9-202ENST00000532602 FCRL1Q96LA6 429 aa13.43□□□□□ -0.26
PCDHA9-202ENST00000532602 FAM96BQ9Y3D0 163 aa13.43□□□□□ -0.26
PCDHA9-202ENST00000532602 DFFBO76075 338 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 SHBQ15464 509 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 FAM74A1Q5RGS3 127 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 ZNF468Q5VIY5 522 aaPredicted RBP13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 ANKRD16Q6P6B7 361 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 PLXDC2Q6UX71 529 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 S1PR3Q99500 378 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 RBFOX1Q9NWB1 397 aaKnown RBP13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 CSF3P09919 207 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 AADACP22760 399 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 GLRA1P23415 457 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 SERPINF1P36955 418 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 IAH1Q2TAA2 248 aaPredicted RBP13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 SOWAHCQ53LP3 525 aaPredicted RBP13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 LHFPL2Q6ZUX7 228 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 OVCH1Q7RTY7 1134 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 H2BFWTQ7Z2G1 175 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 GCNT2Q8N0V5 402 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 OR1M1Q8NGA1 313 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 C5orf49A4QMS7 147 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 AGAP14A8MT82 685 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 C1orf53Q5VUE5 145 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 HPSE2Q8WWQ2 592 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 TXNIPQ9H3M7 391 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 LGALS8O00214 317 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 MAGEB4O15481 346 aaPredicted RBP13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 KLK8O60259 260 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 OR8U8P0C7N1 319 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 FAM157BP0CG42 384 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 ARRB2P32121 409 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 VASH2Q86V25 355 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 TXN2Q99757 166 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 ATF6BQ99941 703 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 FAM173AQ9BQD7 235 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 SUCNR1Q9BXA5 334 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 IKZF5Q9H5V7 419 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 CGGBP1Q9UFW8 167 aaPredicted RBP13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 SLC5A6Q9Y289 635 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 PMP2P02689 132 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 HOXB3P14651 431 aaPredicted RBP13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 SPI1P17947 270 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 ELK1P19419 428 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 DIO1P49895 249 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 HABP2Q14520 560 aaPredicted RBP13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 PRSS41Q7RTY9 318 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 LAX1Q8IWV1 398 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 SCPEP1Q9HB40 452 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 MED29Q9NX70 200 aa13.42□□□□□ -0.26
PCDHA9-202ENST00000532602 COL11A1P12107 1806 aaPredicted RBP13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 SNAPINO95295 136 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 PIPP12273 146 aaPredicted RBP13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 GNB2P62879 340 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 RPL18Q07020 188 aaKnown RBP13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 LIMS2Q7Z4I7 341 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 OR1L3Q8NH93 324 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 DVL3Q92997 716 aaPredicted RBP13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 ACER3Q9NUN7 267 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 HSD17B6O14756 317 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 EMP3P54852 163 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 DSCR4P56555 118 aaPredicted RBP13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 RPL11P62913 178 aaKnown RBP13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 PRAMEF5Q5TYX0 476 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 PRAMEF6Q5VXH4 476 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 ADGRF3Q8IZF5 1079 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 OR10X1Q8NGY0 326 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 PDCD1LG2Q9BQ51 273 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 S1PR5Q9H228 398 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 ERVMER34-1Q9H9K5 563 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 ACOXLQ9NUZ1 547 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 A0A0A6YYD5 115 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 PMS2P2O95744 297 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 RPS27P42677 84 aaKnown RBP13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 BEX5Q5H9J7 111 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 OR6K3Q8NGY3 331 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 OR51E1Q8TCB6 317 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 HRH4Q9H3N8 390 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 MTCH2Q9Y6C9 303 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 KCNE3Q9Y6H6 103 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 CRYM-AS1A6NIL9 109 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 DHHO43323 396 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 SRP9P49458 86 aaKnown RBP13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 FAM26EQ8N5C1 309 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 SLC35E1Q96K37 410 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 MBOAT4Q96T53 435 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 ZCCHC4Q9H5U6 513 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 METTL17Q9H7H0 456 aaPredicted RBP13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 TSPAN12O95859 305 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 AARDQ4LEZ3 155 aa13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 ZNF486Q96H40 463 aaPredicted RBP13.41□□□□□ -0.26
PCDHA9-202ENST00000532602 AGERQ15109 404 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 USP51Q70EK9 711 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 FAM185AQ8N0U4 392 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 CARFQ8N187 725 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 AMER3Q8N944 861 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms