RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 RAD51Q06609 339 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 STX3Q13277 289 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 CHRNA6Q15825 494 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 TTLL9Q3SXZ7 439 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 DNAL1Q4LDG9 190 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 PHYHD1Q5SRE7 291 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 PRMT9Q6P2P2 845 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 METAP1DQ6UB28 335 aaPredicted RBP2.6□□□□□ -1.99
CTR9-204ENST00000529355 TMCO2Q7Z6W1 182 aaPredicted RBP2.6□□□□□ -1.99
CTR9-204ENST00000529355 CDR2LQ86X02 465 aaPredicted RBP2.6□□□□□ -1.99
CTR9-204ENST00000529355 IFT20Q8IY31 132 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 IQCKQ8N0W5 287 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 C15orf56Q8N910 161 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 OR5T1Q8NG75 326 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 CD300LFQ8TDQ1 290 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 CAPSLQ8WWF8 208 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 NPY6RQ99463 290 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 KCNS3Q9BQ31 491 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 MTG1Q9BT17 334 aaPredicted RBP2.6□□□□□ -1.99
CTR9-204ENST00000529355 CALN1Q9BXU9 219 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 HDHD2Q9H0R4 259 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 NOX3Q9HBY0 568 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 MRPS30Q9NP92 439 aaKnown RBP2.6□□□□□ -1.99
CTR9-204ENST00000529355 SAMSN1Q9NSI8 373 aaKnown RBP2.6□□□□□ -1.99
CTR9-204ENST00000529355 C20orf96Q9NUD7 363 aaPredicted RBP2.6□□□□□ -1.99
CTR9-204ENST00000529355 RAB20Q9NX57 234 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 ZNF639Q9UID6 485 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 ZNF222Q9UK12 451 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 ERGIC3Q9Y282 383 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 IGSF9BQ9UPX0 1349 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 NAV1Q8NEY1 1877 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 MYH13Q9UKX3 1938 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 PCM1Q15154 2024 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 CAMSAP2Q08AD1 1489 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 MRC2Q9UBG0 1479 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 KIF26AQ9ULI4 1882 aaPredicted RBP2.59□□□□□ -1.99
CTR9-204ENST00000529355 A0A1B0GVX0 72 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 HIDE1A8MVS5 230 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 H3BNH8 94 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 HAS3O00219 553 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 WRBO00258 174 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 CCL21O00585 134 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 SLC9A3R1O14745 358 aaPredicted RBP2.59□□□□□ -1.99
CTR9-204ENST00000529355 PFDN6O15212 129 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 SHOX2O60902 331 aaPredicted RBP2.59□□□□□ -1.99
CTR9-204ENST00000529355 NOS1APO75052 506 aaPredicted RBP2.59□□□□□ -1.99
CTR9-204ENST00000529355 CBR3O75828 277 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 CIAO1O76071 339 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 RPP14O95059 124 aaKnown RBP2.59□□□□□ -1.99
CTR9-204ENST00000529355 IFNA16P05015 189 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 FGF4P08620 206 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 STAG3L3P0CL85 134 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 DBTP11182 482 aaKnown RBP2.59□□□□□ -1.99
CTR9-204ENST00000529355 RALBP11234 206 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 CCR8P51685 355 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 AP1S2P56377 157 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 EIF3EP60228 445 aaKnown RBP2.59□□□□□ -1.99
CTR9-204ENST00000529355 HPCAP84074 193 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 PON3Q15166 354 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 UAP1Q16222 522 aaPredicted RBP2.59□□□□□ -1.99
CTR9-204ENST00000529355 HSP90AA4PQ58FG1 418 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 TEX30Q5JUR7 227 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 TMEM31Q5JXX7 168 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 LY6G6FQ5SQ64 297 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 C1orf185Q5T7R7 199 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 HES5Q5TA89 166 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 METTL21CQ5VZV1 264 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 C3orf33Q6P1S2 294 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 C4orf22Q6V702 233 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 HDDC2Q7Z4H3 204 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 LHFPL3Q86UP9 236 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 UBE2J2Q8N2K1 259 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 ZCCHC7Q8N3Z6 543 aaKnown RBP2.59□□□□□ -1.99
CTR9-204ENST00000529355 NATD1Q8N6N6 113 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 TTC29Q8NA56 475 aaPredicted RBP2.59□□□□□ -1.99
CTR9-204ENST00000529355 FAM83FQ8NEG4 500 aaPredicted RBP2.59□□□□□ -1.99
CTR9-204ENST00000529355 OR2G2Q8NGZ5 317 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 RAB3IL1Q8TBN0 382 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 PHOSPHO2Q8TCD6 241 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 SLC2A14Q8TDB8 520 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 TMIGD2Q96BF3 282 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 FOPNLQ96NB1 174 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 CTRCQ99895 268 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 CHAC1Q9BUX1 264 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 RSPO3Q9BXY4 272 aaPredicted RBP2.59□□□□□ -1.99
CTR9-204ENST00000529355 MRPL37Q9BZE1 423 aaKnown RBP2.59□□□□□ -1.99
CTR9-204ENST00000529355 ROPN1BQ9BZX4 212 aaPredicted RBP2.59□□□□□ -1.99
CTR9-204ENST00000529355 NIPAL2Q9H841 368 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 ZNF430Q9H8G1 570 aaPredicted RBP2.59□□□□□ -1.99
CTR9-204ENST00000529355 NT5MQ9NPB1 228 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 EXD2Q9NVH0 621 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 OPN4Q9UHM6 478 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 NUP50Q9UKX7 468 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 PIGLQ9Y2B2 252 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 AP3M1Q9Y2T2 418 aa2.59□□□□□ -1.99
CTR9-204ENST00000529355 SAMHD1Q9Y3Z3 626 aaKnown RBP2.59□□□□□ -1.99
CTR9-204ENST00000529355 YTHDF2Q9Y5A9 579 aaKnown RBP2.59□□□□□ -1.99
CTR9-204ENST00000529355 MRPS18BQ9Y676 258 aaKnown RBP2.59□□□□□ -1.99
CTR9-204ENST00000529355 RTL9Q8NET4 1388 aa2.59□□□□□ -2
CTR9-204ENST00000529355 CPSF1Q10570 1443 aaKnown RBP2.59□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms