RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 IL19Q9UHD0 177 aa13.05□□□□□ -0.32
CLNS1A-210ENST00000528364 INSIG2Q9Y5U4 225 aa13.05□□□□□ -0.32
CLNS1A-210ENST00000528364 AUP1Q9Y679 476 aa13.05□□□□□ -0.32
CLNS1A-210ENST00000528364 IGHV3OR16-10A0A075B7F0 116 aa13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 UNC119BA6NIH7 251 aa13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 F5H0A9 414 aaPredicted RBP13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 TMEM178BH3BS89 294 aa13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 RAC2P15153 192 aa13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 TUBG1P23258 451 aa13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 SDHAP31040 664 aa13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 CD80P33681 288 aa13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 PRSS12P56730 875 aa13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 LSM6P62312 80 aaKnown RBP13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 TUSC1Q2TAM9 212 aa13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 FGD3Q5JSP0 725 aa13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 FAM201AQ5SY85 155 aa13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 GPR139Q6DWJ6 353 aa13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 CORO6Q6QEF8 472 aa13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 JAZF1Q86VZ6 243 aa13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 OR10AD1Q8NGE0 317 aa13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 RSRC1Q96IZ7 334 aaKnown RBP13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 C7orf34Q96L11 122 aa13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 ZNF48Q96MX3 618 aaPredicted RBP13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 KCTD14Q9BQ13 255 aaPredicted RBP13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 ANKRD19PQ9H560 264 aa13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 WDR76Q9H967 626 aa13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 TMEM165Q9HC07 324 aa13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 SRA1Q9HD15 236 aaKnown RBP13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 TUBG2Q9NRH3 451 aa13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 DDX28Q9NUL7 540 aaKnown RBP13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 TMEM5Q9Y2B1 443 aa13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 POLR3KQ9Y2Y1 108 aaPredicted RBP13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 PCDHGB1Q9Y5G3 927 aa13.04□□□□□ -0.32
CLNS1A-210ENST00000528364 A0A1W2PRQ8 180 aa13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 CEACAM18A8MTB9 384 aa13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 WIPF1O43516 503 aa13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 PPP1R3DO95685 299 aa13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 CYB5R3P00387 301 aaPredicted RBP13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 WNT2P09544 360 aa13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 SELEP16581 610 aa13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 PMELP40967 661 aa13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 NUDT2P50583 147 aa13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 MMP16P51512 607 aa13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 PSME3P61289 254 aa13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 DGCR6Q14129 220 aa13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 KCNMB1Q16558 191 aa13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 ARMCX4Q5H9R4 360 aa13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 GLYATQ6IB77 296 aa13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 OR8G5Q8NG78 346 aa13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 POP5Q969H6 163 aaKnown RBP13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 MEGF10Q96KG7 1140 aa13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 C1orf147Q96MC9 270 aaPredicted RBP13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 GPX7Q96SL4 187 aaPredicted RBP13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 CCDC134Q9H6E4 229 aa13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 NUP50Q9UKX7 468 aa13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 AURKCQ9UQB9 309 aa13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 FAM32AQ9Y421 112 aaKnown RBP13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 LHFPL6Q9Y693 200 aa13.03□□□□□ -0.32
CLNS1A-210ENST00000528364 F5H5P2 479 aa13.02□□□□□ -0.33
CLNS1A-210ENST00000528364 SURF4O15260 269 aa13.02□□□□□ -0.33
CLNS1A-210ENST00000528364 TXNDC12O95881 172 aa13.02□□□□□ -0.33
CLNS1A-210ENST00000528364 RHCEP18577 417 aa13.02□□□□□ -0.33
CLNS1A-210ENST00000528364 MDH2P40926 338 aaKnown RBP13.02□□□□□ -0.33
CLNS1A-210ENST00000528364 HIST1H3AP68431 136 aa13.02□□□□□ -0.33
CLNS1A-210ENST00000528364 PAX8Q06710 450 aa13.02□□□□□ -0.33
CLNS1A-210ENST00000528364 HIST2H3PS2Q5TEC6 136 aa13.02□□□□□ -0.33
CLNS1A-210ENST00000528364 FBXW12Q6X9E4 464 aa13.02□□□□□ -0.33
CLNS1A-210ENST00000528364 HACD2Q6Y1H2 254 aa13.02□□□□□ -0.33
CLNS1A-210ENST00000528364 DPY19L2P2Q6ZN68 376 aa13.02□□□□□ -0.33
CLNS1A-210ENST00000528364 HIST2H3AQ71DI3 136 aa13.02□□□□□ -0.33
CLNS1A-210ENST00000528364 DOK3Q7L591 496 aa13.02□□□□□ -0.33
CLNS1A-210ENST00000528364 NAA40Q86UY6 237 aa13.02□□□□□ -0.33
CLNS1A-210ENST00000528364 RNF148Q8N7C7 305 aa13.02□□□□□ -0.33
CLNS1A-210ENST00000528364 BHLHE23Q8NDY6 225 aa13.02□□□□□ -0.33
CLNS1A-210ENST00000528364 ERMAPQ96PL5 475 aaPredicted RBP13.02□□□□□ -0.33
CLNS1A-210ENST00000528364 FUZQ9BT04 418 aa13.02□□□□□ -0.33
CLNS1A-210ENST00000528364 NDEL1Q9GZM8 345 aa13.02□□□□□ -0.33
CLNS1A-210ENST00000528364 NTN4Q9HB63 628 aa13.02□□□□□ -0.33
CLNS1A-210ENST00000528364 RPS6KA6Q9UK32 745 aa13.02□□□□□ -0.33
CLNS1A-210ENST00000528364 B9D1Q9UPM9 204 aa13.02□□□□□ -0.33
CLNS1A-210ENST00000528364 POLR1DQ9Y2S0 133 aa13.02□□□□□ -0.33
CLNS1A-210ENST00000528364 V9GYQ6 96 aa13.02□□□□□ -0.33
CLNS1A-210ENST00000528364 IGLV1-36A0A0B4J1U3 117 aa13.01□□□□□ -0.33
CLNS1A-210ENST00000528364 A8MXK9 166 aa13.01□□□□□ -0.33
CLNS1A-210ENST00000528364 MLNRO43193 412 aa13.01□□□□□ -0.33
CLNS1A-210ENST00000528364 CCDC22O60826 627 aa13.01□□□□□ -0.33
CLNS1A-210ENST00000528364 HLA-DPB1P04440 258 aa13.01□□□□□ -0.33
CLNS1A-210ENST00000528364 IGHV4-38-2P0DP08 117 aa13.01□□□□□ -0.33
CLNS1A-210ENST00000528364 PAX2Q02962 417 aa13.01□□□□□ -0.33
CLNS1A-210ENST00000528364 ESCO2Q56NI9 601 aa13.01□□□□□ -0.33
CLNS1A-210ENST00000528364 RBMS3Q6XE24 437 aaKnown RBP13.01□□□□□ -0.33
CLNS1A-210ENST00000528364 MOGAT3Q86VF5 341 aa13.01□□□□□ -0.33
CLNS1A-210ENST00000528364 LINC00346Q8IVM7 164 aa13.01□□□□□ -0.33
CLNS1A-210ENST00000528364 OR6V1Q8N148 313 aa13.01□□□□□ -0.33
CLNS1A-210ENST00000528364 OR13G1Q8NGZ3 307 aa13.01□□□□□ -0.33
CLNS1A-210ENST00000528364 SGMS2Q8NHU3 365 aa13.01□□□□□ -0.33
CLNS1A-210ENST00000528364 APOBEC3DQ96AK3 386 aaPredicted RBP13.01□□□□□ -0.33
CLNS1A-210ENST00000528364 COG8Q96MW5 612 aa13.01□□□□□ -0.33
CLNS1A-210ENST00000528364 ZNF582Q96NG8 517 aaPredicted RBP13.01□□□□□ -0.33
CLNS1A-210ENST00000528364 NMNAT3Q96T66 252 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms