RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 U3KQ87 197 aa13.66□□□□□ -0.22
USH1C-207ENST00000527720 ZNF878C9JN71 531 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 G3V3Q6 166 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 PYCARD-AS1I3L0S3 204 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 ERVH48-1M5A8F1 160 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 OR2A4O95047 310 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 BDKRB2P30411 391 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 RAP2BP61225 183 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 SLC35A1P78382 337 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 C19orf57Q0VDD7 668 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 KCNMB1Q16558 191 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 LGALSLQ3ZCW2 172 aaPredicted RBP13.65□□□□□ -0.22
USH1C-207ENST00000527720 STEAP1BQ6NZ63 245 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 SLC25A47Q6Q0C1 308 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 ZNF813Q6ZN06 617 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 OR2AJ1Q8NGZ0 328 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 SEH1LQ96EE3 360 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 OR2A7Q96R45 310 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 RYDENQ9NUL5 291 aaKnown RBP13.65□□□□□ -0.22
USH1C-207ENST00000527720 RHBDD3Q9Y3P4 386 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 A0A1W2PPL8 197 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 UBE2QL1A1L167 161 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 AQP7P3A6NL99 342 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 EIF1AYO14602 144 aaKnown RBP13.65□□□□□ -0.22
USH1C-207ENST00000527720 TSC22D2O75157 780 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 NR2C1P13056 603 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 ZNF43P17038 809 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 PSMA6P60900 246 aaKnown RBP13.65□□□□□ -0.22
USH1C-207ENST00000527720 DHODHQ02127 395 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 INPP5JQ15735 1006 aaPredicted RBP13.65□□□□□ -0.22
USH1C-207ENST00000527720 HIST3H3Q16695 136 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 RAB12Q6IQ22 244 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 OR10S1Q8NGN2 331 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 M1APQ8TC57 530 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 IMMP1LQ96LU5 166 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 UQCC2Q9BRT2 126 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 HEXA-AS1Q9H8Q6 139 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 EIF3KQ9UBQ5 218 aaKnown RBP13.65□□□□□ -0.22
USH1C-207ENST00000527720 GDF2Q9UK05 429 aaPredicted RBP13.65□□□□□ -0.22
USH1C-207ENST00000527720 RAB22AQ9UL26 194 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 LHFPL6Q9Y693 200 aa13.65□□□□□ -0.22
USH1C-207ENST00000527720 KIAA1549Q9HCM3 1950 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 VCANP13611 3396 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 A0A1W2PNR3 127 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 C9J4A7 227 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 SYT7O43581 403 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 CER1O95813 267 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 C4BPBP20851 252 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 ZFP36L1Q07352 338 aaKnown RBP13.64□□□□□ -0.23
USH1C-207ENST00000527720 ZNF627Q7L945 461 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 GPAT4Q86UL3 456 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 GABRG1Q8N1C3 465 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 GTPBP8Q8N3Z3 284 aaPredicted RBP13.64□□□□□ -0.23
USH1C-207ENST00000527720 MAFAQ8NHW3 353 aaPredicted RBP13.64□□□□□ -0.23
USH1C-207ENST00000527720 FGGYQ96C11 551 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 ALX4Q9H161 411 aaPredicted RBP13.64□□□□□ -0.23
USH1C-207ENST00000527720 TMEM185BQ9H7F4 350 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 TMEM138Q9NPI0 162 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 UPB1Q9UBR1 384 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 METTL21EPA6NDL7 271 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 PMS2P2O95744 297 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 CD3DP04234 171 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 ZNF28P17035 718 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 MC2RQ01718 297 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 PMPCAQ10713 525 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 ZNF529Q6P280 563 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 ZNF680Q8NEM1 530 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 OR4D10Q8NGI6 311 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 OR51S1Q8NGJ8 323 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 OR5D14Q8NGL3 314 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 CLEC4MQ9H2X3 399 aaPredicted RBP13.64□□□□□ -0.23
USH1C-207ENST00000527720 PIPOXQ9P0Z9 390 aa13.64□□□□□ -0.23
USH1C-207ENST00000527720 LOC101059948A0A1B0GTJ6 334 aa13.63□□□□□ -0.23
USH1C-207ENST00000527720 TNFRSF10AO00220 468 aa13.63□□□□□ -0.23
USH1C-207ENST00000527720 TLX3O43711 291 aaPredicted RBP13.63□□□□□ -0.23
USH1C-207ENST00000527720 LMX1BO60663 402 aa13.63□□□□□ -0.23
USH1C-207ENST00000527720 SCGNO76038 276 aa13.63□□□□□ -0.23
USH1C-207ENST00000527720 UMODP07911 640 aa13.63□□□□□ -0.23
USH1C-207ENST00000527720 ERCC1P07992 297 aaPredicted RBP13.63□□□□□ -0.23
USH1C-207ENST00000527720 VSIG10L2P0DP72 767 aa13.63□□□□□ -0.23
USH1C-207ENST00000527720 COX6A1P12074 109 aa13.63□□□□□ -0.23
USH1C-207ENST00000527720 EIF1AXP47813 144 aaKnown RBP13.63□□□□□ -0.23
USH1C-207ENST00000527720 CSRP2Q16527 193 aa13.63□□□□□ -0.23
USH1C-207ENST00000527720 TMEM176BQ3YBM2 270 aaPredicted RBP13.63□□□□□ -0.23
USH1C-207ENST00000527720 CFAP77Q6ZQR2 320 aa13.63□□□□□ -0.23
USH1C-207ENST00000527720 TMPPEQ6ZT21 453 aa13.63□□□□□ -0.23
USH1C-207ENST00000527720 SLC22A24Q8N4F4 322 aa13.63□□□□□ -0.23
USH1C-207ENST00000527720 UXS1Q8NBZ7 420 aa13.63□□□□□ -0.23
USH1C-207ENST00000527720 OR1M1Q8NGA1 313 aa13.63□□□□□ -0.23
USH1C-207ENST00000527720 OR5M1Q8NGP8 315 aa13.63□□□□□ -0.23
USH1C-207ENST00000527720 MR1Q95460 341 aa13.63□□□□□ -0.23
USH1C-207ENST00000527720 ANGPTL4Q9BY76 406 aa13.63□□□□□ -0.23
USH1C-207ENST00000527720 TMPRSS13Q9BYE2 586 aa13.63□□□□□ -0.23
USH1C-207ENST00000527720 SEC61A2Q9H9S3 476 aa13.63□□□□□ -0.23
USH1C-207ENST00000527720 POLR1DQ9Y2S0 133 aa13.63□□□□□ -0.23
USH1C-207ENST00000527720 OR2M5A3KFT3 312 aa13.62□□□□□ -0.23
USH1C-207ENST00000527720 ZNF726A6NNF4 738 aa13.62□□□□□ -0.23
USH1C-207ENST00000527720 SULT2B1O00204 365 aa13.62□□□□□ -0.23
USH1C-207ENST00000527720 BPNT1O95861 308 aa13.62□□□□□ -0.23
USH1C-207ENST00000527720 ZNF81P51508 661 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms