RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 HOXA3O43365 443 aaPredicted RBP11.91□□□□□ -0.5
CPSF1-201ENST00000526271 CTLA4P16410 223 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 PRSS12P56730 875 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 TAS2R41P59536 307 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 CTXN1P60606 82 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 TAF11Q15544 211 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 RSPO1Q2MKA7 263 aaPredicted RBP11.91□□□□□ -0.5
CPSF1-201ENST00000526271 DEFB112Q30KQ8 113 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 CCDC92Q53HC0 331 aaPredicted RBP11.91□□□□□ -0.5
CPSF1-201ENST00000526271 MESTQ5EB52 335 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 INTS11Q5TA45 600 aaKnown RBP11.91□□□□□ -0.5
CPSF1-201ENST00000526271 LYPD2Q6UXB3 125 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 RBMS3Q6XE24 437 aaKnown RBP11.91□□□□□ -0.5
CPSF1-201ENST00000526271 BRD3OSQ6XYD6 125 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 TSEN54Q7Z6J9 526 aaKnown RBP11.91□□□□□ -0.5
CPSF1-201ENST00000526271 OR5AS1Q8N127 324 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 KLHL36Q8N4N3 616 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 FAM156AQ8NDB6 213 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 OR10AD1Q8NGE0 317 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 OR13C2Q8NGS9 318 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 HAVCR1Q96D42 359 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 GPA33Q99795 319 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 CDADC1Q9BWV3 514 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 KCNN2Q9H2S1 579 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 MMADHCQ9H3L0 296 aaPredicted RBP11.91□□□□□ -0.5
CPSF1-201ENST00000526271 ZMAT3Q9HA38 289 aaKnown RBP11.91□□□□□ -0.5
CPSF1-201ENST00000526271 IL19Q9UHD0 177 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 MED31Q9Y3C7 131 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 ADAM18Q9Y3Q7 739 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 MMP24Q9Y5R2 645 aa11.91□□□□□ -0.5
CPSF1-201ENST00000526271 OR6C6A6NF89 314 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 C22orf46C9J442 243 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 CXCR6O00574 342 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 CDC42EP2O14613 210 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 ABHD16AO95870 558 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 PPIAL4GP0DN37 164 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 COX5BP10606 129 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 IFI30P13284 250 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 MSR1P21757 451 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 KDELR2P33947 212 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 MSX2P35548 267 aaPredicted RBP11.9□□□□□ -0.5
CPSF1-201ENST00000526271 MDH2P40926 338 aaKnown RBP11.9□□□□□ -0.5
CPSF1-201ENST00000526271 TRIM25Q14258 630 aaKnown RBP11.9□□□□□ -0.5
CPSF1-201ENST00000526271 OCLNQ16625 522 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 ZSCAN26Q16670 478 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 GLYATQ6IB77 296 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 C16orf87Q6PH81 154 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 TBPL2Q6SJ96 375 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 ZNF841Q6ZN19 808 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 FAM122BQ7Z309 247 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 KLBQ86Z14 1044 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 KIR3DL3Q8N743 410 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 OR52E2Q8NGJ4 325 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 OR51A7Q8NH64 312 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 BPIFA2Q96DR5 249 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 CLPTM1LQ96KA5 538 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 MEGF10Q96KG7 1140 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 Q96M85 177 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 TMEM246Q9BRR3 403 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 MS4A7Q9GZW8 240 aaPredicted RBP11.9□□□□□ -0.5
CPSF1-201ENST00000526271 GORASP2Q9H8Y8 452 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 ELOVL3Q9HB03 270 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 PPP1R3CQ9UQK1 317 aa11.9□□□□□ -0.5
CPSF1-201ENST00000526271 A0A1B0GWJ7 208 aa11.89□□□□□ -0.51
CPSF1-201ENST00000526271 FAM181BA6NEQ2 426 aa11.89□□□□□ -0.51
CPSF1-201ENST00000526271 GSTA4O15217 222 aa11.89□□□□□ -0.51
CPSF1-201ENST00000526271 DOK2O60496 412 aa11.89□□□□□ -0.51
CPSF1-201ENST00000526271 YAP1P46937 504 aaKnown RBP11.89□□□□□ -0.51
CPSF1-201ENST00000526271 MS4A2Q01362 244 aa11.89□□□□□ -0.51
CPSF1-201ENST00000526271 RUSC1-AS1Q66K80 236 aa11.89□□□□□ -0.51
CPSF1-201ENST00000526271 OR2T2Q6IF00 324 aa11.89□□□□□ -0.51
CPSF1-201ENST00000526271 SPATC1Q76KD6 591 aa11.89□□□□□ -0.51
CPSF1-201ENST00000526271 HDDC2Q7Z4H3 204 aa11.89□□□□□ -0.51
CPSF1-201ENST00000526271 SYT9Q86SS6 491 aa11.89□□□□□ -0.51
CPSF1-201ENST00000526271 NRMQ8IXM6 262 aa11.89□□□□□ -0.51
CPSF1-201ENST00000526271 C1orf174Q8IYL3 243 aa11.89□□□□□ -0.51
CPSF1-201ENST00000526271 C19orf18Q8NEA5 215 aa11.89□□□□□ -0.51
CPSF1-201ENST00000526271 SLC26A7Q8TE54 656 aa11.89□□□□□ -0.51
CPSF1-201ENST00000526271 RAB40AQ8WXH6 277 aa11.89□□□□□ -0.51
CPSF1-201ENST00000526271 SLC25A28Q96A46 364 aa11.89□□□□□ -0.51
CPSF1-201ENST00000526271 CITED1Q99966 193 aa11.89□□□□□ -0.51
CPSF1-201ENST00000526271 MRI1Q9BV20 369 aa11.89□□□□□ -0.51
CPSF1-201ENST00000526271 SSBP3Q9BWW4 388 aaPredicted RBP11.89□□□□□ -0.51
CPSF1-201ENST00000526271 C1RLQ9NZP8 487 aa11.89□□□□□ -0.51
CPSF1-201ENST00000526271 STX18Q9P2W9 335 aaKnown RBP11.89□□□□□ -0.51
CPSF1-201ENST00000526271 RHCGQ9UBD6 479 aa11.89□□□□□ -0.51
CPSF1-201ENST00000526271 NDRG4Q9ULP0 352 aaKnown RBP11.89□□□□□ -0.51
CPSF1-201ENST00000526271 LRCH1Q9Y2L9 728 aa11.89□□□□□ -0.51
CPSF1-201ENST00000526271 KIR2DS1A0A191URI9 304 aa11.88□□□□□ -0.51
CPSF1-201ENST00000526271 ACOT8O14734 319 aa11.88□□□□□ -0.51
CPSF1-201ENST00000526271 HTR5AP47898 357 aa11.88□□□□□ -0.51
CPSF1-201ENST00000526271 FXYD6P3P58550 94 aa11.88□□□□□ -0.51
CPSF1-201ENST00000526271 PRKCDQ05655 676 aa11.88□□□□□ -0.51
CPSF1-201ENST00000526271 TRAP1Q12931 704 aaKnown RBP11.88□□□□□ -0.51
CPSF1-201ENST00000526271 ZNF404Q494X3 552 aa11.88□□□□□ -0.51
CPSF1-201ENST00000526271 CYBRD1Q53TN4 286 aa11.88□□□□□ -0.51
CPSF1-201ENST00000526271 ESCO2Q56NI9 601 aa11.88□□□□□ -0.51
CPSF1-201ENST00000526271 ALDH16A1Q8IZ83 802 aa11.88□□□□□ -0.51
CPSF1-201ENST00000526271 OR10S1Q8NGN2 331 aa11.88□□□□□ -0.51
CPSF1-201ENST00000526271 PRRC1Q96M27 445 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms