RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 TRMT12Q53H54 448 aaKnown RBP5.49□□□□□ -1.53
NEDD8-203ENST00000524927 TSPO2Q5TGU0 170 aa5.49□□□□□ -1.53
NEDD8-203ENST00000524927 KHDRBS2Q5VWX1 349 aaKnown RBP5.49□□□□□ -1.53
NEDD8-203ENST00000524927 PAQR6Q6TCH4 344 aa5.49□□□□□ -1.53
NEDD8-203ENST00000524927 CASP12Q6UXS9 341 aa5.49□□□□□ -1.53
NEDD8-203ENST00000524927 LRRC28Q86X40 367 aaPredicted RBP5.49□□□□□ -1.53
NEDD8-203ENST00000524927 ARHGAP24Q8N264 748 aa5.49□□□□□ -1.53
NEDD8-203ENST00000524927 ZNF473Q8WTR7 871 aaKnown RBP5.49□□□□□ -1.53
NEDD8-203ENST00000524927 TSEN15Q8WW01 171 aaKnown RBP5.49□□□□□ -1.53
NEDD8-203ENST00000524927 BCL2L2Q92843 193 aaPredicted RBP5.49□□□□□ -1.53
NEDD8-203ENST00000524927 FAM162AQ96A26 154 aa5.49□□□□□ -1.53
NEDD8-203ENST00000524927 MOB3AQ96BX8 217 aa5.49□□□□□ -1.53
NEDD8-203ENST00000524927 FEVQ99581 238 aa5.49□□□□□ -1.53
NEDD8-203ENST00000524927 WACQ9BTA9 647 aa5.49□□□□□ -1.53
NEDD8-203ENST00000524927 EVA1AQ9H8M9 152 aa5.49□□□□□ -1.53
NEDD8-203ENST00000524927 EXD2Q9NVH0 621 aa5.49□□□□□ -1.53
NEDD8-203ENST00000524927 FBXO5Q9UKT4 447 aa5.49□□□□□ -1.53
NEDD8-203ENST00000524927 CAB39Q9Y376 341 aaPredicted RBP5.49□□□□□ -1.53
NEDD8-203ENST00000524927 OR10H1Q9Y4A9 318 aa5.49□□□□□ -1.53
NEDD8-203ENST00000524927 hCG_1818297A0A087WSY0 165 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 A0A0A6YYD5 115 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 A0A1W2PPQ1 181 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 CTAGE9A4FU28 777 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 SDR42E2A6NKP2 422 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 PRR32B1ATL7 298 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 PRAC2D3DTV9 90 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 PRR23D1E9PI22 279 aaPredicted RBP5.48□□□□□ -1.53
NEDD8-203ENST00000524927 SAP18O00422 153 aaKnown RBP5.48□□□□□ -1.53
NEDD8-203ENST00000524927 NR5A2O00482 541 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 VAPBO95292 243 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 WNT2P09544 360 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 FAM58BPP0C7Q3 252 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 CTAGE8P0CG41 777 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 RBMY1CP0DJD4 496 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 PRR23D2P0DMB1 279 aaPredicted RBP5.48□□□□□ -1.53
NEDD8-203ENST00000524927 UROSP10746 265 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 ZNF14P17017 642 aaPredicted RBP5.48□□□□□ -1.53
NEDD8-203ENST00000524927 MPZP25189 248 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 CTNNA1P35221 906 aaKnown RBP5.48□□□□□ -1.53
NEDD8-203ENST00000524927 CFHR2P36980 270 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 RAP1GDS1P52306 607 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 KLHL30Q0D2K2 578 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 COX10Q12887 443 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 FOXF1Q12946 379 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 SELENBP1Q13228 472 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 ZNF585BQ52M93 769 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 PRR27Q6MZM9 219 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 ZNF774Q6NX45 483 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 APOOLQ6UXV4 268 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 CTAGE4Q8IX94 777 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 Q8N9P0 234 aaPredicted RBP5.48□□□□□ -1.53
NEDD8-203ENST00000524927 MLKLQ8NB16 471 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 PIGXQ8TBF5 258 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 WDR34Q96EX3 536 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 CMTM7Q96FZ5 175 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 CPNE1Q99829 537 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 CENPKQ9BS16 269 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 EFCAB11Q9BUY7 163 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 NMUR2Q9GZQ4 415 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 DDX31Q9H8H2 851 aaKnown RBP5.48□□□□□ -1.53
NEDD8-203ENST00000524927 RAB18Q9NP72 206 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 CHCHD3Q9NX63 227 aaKnown RBP5.48□□□□□ -1.53
NEDD8-203ENST00000524927 SLCO1C1Q9NYB5 712 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 B3GAT1Q9P2W7 334 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 SLC9A8Q9Y2E8 581 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 MAB21L2Q9Y586 359 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 FAT2Q9NYQ8 4349 aa5.48□□□□□ -1.53
NEDD8-203ENST00000524927 PLPP1O14494 284 aa5.47□□□□□ -1.53
NEDD8-203ENST00000524927 SNRNP70P08621 437 aaKnown RBP5.47□□□□□ -1.53
NEDD8-203ENST00000524927 SMIM18P0DKX4 95 aa5.47□□□□□ -1.53
NEDD8-203ENST00000524927 ZNF35P13682 527 aa5.47□□□□□ -1.53
NEDD8-203ENST00000524927 ZNF26P17031 533 aaPredicted RBP5.47□□□□□ -1.53
NEDD8-203ENST00000524927 SERPINB1P30740 379 aa5.47□□□□□ -1.53
NEDD8-203ENST00000524927 PSMD4P55036 377 aaKnown RBP5.47□□□□□ -1.53
NEDD8-203ENST00000524927 KRTAP10-7P60409 375 aaPredicted RBP5.47□□□□□ -1.53
NEDD8-203ENST00000524927 CRADDP78560 199 aa5.47□□□□□ -1.53
NEDD8-203ENST00000524927 SARNPP82979 210 aaKnown RBP5.47□□□□□ -1.53
NEDD8-203ENST00000524927 ALKBH6Q3KRA9 238 aa5.47□□□□□ -1.53
NEDD8-203ENST00000524927 PAGE2BQ5JRK9 111 aa5.47□□□□□ -1.53
NEDD8-203ENST00000524927 HIST2H2AA3Q6FI13 130 aa5.47□□□□□ -1.53
NEDD8-203ENST00000524927 SPSB3Q6PJ21 355 aa5.47□□□□□ -1.53
NEDD8-203ENST00000524927 PIWIL3Q7Z3Z3 882 aaKnown RBP5.47□□□□□ -1.53
NEDD8-203ENST00000524927 Q8N2B8 174 aa5.47□□□□□ -1.53
NEDD8-203ENST00000524927 ATP6V1C2Q8NEY4 427 aa5.47□□□□□ -1.53
NEDD8-203ENST00000524927 ACTL9Q8TC94 416 aa5.47□□□□□ -1.53
NEDD8-203ENST00000524927 CCDC107Q8WV48 283 aa5.47□□□□□ -1.53
NEDD8-203ENST00000524927 PLEKHA8Q96JA3 519 aa5.47□□□□□ -1.53
NEDD8-203ENST00000524927 ZNF583Q96ND8 569 aa5.47□□□□□ -1.53
NEDD8-203ENST00000524927 DCTN5Q9BTE1 182 aa5.47□□□□□ -1.53
NEDD8-203ENST00000524927 RMND5AQ9H871 391 aa5.47□□□□□ -1.53
NEDD8-203ENST00000524927 SERINC1Q9NRX5 453 aa5.47□□□□□ -1.53
NEDD8-203ENST00000524927 TAAR3PQ9P1P4 343 aa5.47□□□□□ -1.53
NEDD8-203ENST00000524927 MRTO4Q9UKD2 239 aaKnown RBP5.47□□□□□ -1.53
NEDD8-203ENST00000524927 FAF1Q9UNN5 650 aaPredicted RBP5.47□□□□□ -1.53
NEDD8-203ENST00000524927 JRKLQ9Y4A0 524 aa5.47□□□□□ -1.53
NEDD8-203ENST00000524927 TSSC4Q9Y5U2 329 aaPredicted RBP5.47□□□□□ -1.53
NEDD8-203ENST00000524927 HMCN2Q8NDA2 5059 aa5.46□□□□□ -1.54
NEDD8-203ENST00000524927 IGLV3-9A0A075B6K5 115 aa5.46□□□□□ -1.54
NEDD8-203ENST00000524927 IGLV5-45A0A087WSX0 123 aa5.46□□□□□ -1.54
NEDD8-203ENST00000524927 A0A1W2PS18 150 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms