RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 INTS14Q96SY0 518 aa10.78□□□□□ -0.68
VEGFA-225ENST00000523950 ZNF184Q99676 751 aaPredicted RBP10.78□□□□□ -0.68
VEGFA-225ENST00000523950 PITX2Q99697 317 aa10.78□□□□□ -0.68
VEGFA-225ENST00000523950 CIB1Q99828 191 aa10.78□□□□□ -0.68
VEGFA-225ENST00000523950 ATF6BQ99941 703 aa10.78□□□□□ -0.68
VEGFA-225ENST00000523950 VRK1Q99986 396 aaPredicted RBP10.78□□□□□ -0.68
VEGFA-225ENST00000523950 SYT3Q9BQG1 590 aa10.78□□□□□ -0.68
VEGFA-225ENST00000523950 OR51B6Q9H340 312 aa10.78□□□□□ -0.68
VEGFA-225ENST00000523950 HINT3Q9NQE9 182 aaKnown RBP10.78□□□□□ -0.68
VEGFA-225ENST00000523950 DDX28Q9NUL7 540 aaKnown RBP10.78□□□□□ -0.68
VEGFA-225ENST00000523950 USE1Q9NZ43 259 aa10.78□□□□□ -0.68
VEGFA-225ENST00000523950 DUSP13Q9UII6 198 aa10.78□□□□□ -0.68
VEGFA-225ENST00000523950 TMEFF2Q9UIK5 374 aaPredicted RBP10.78□□□□□ -0.68
VEGFA-225ENST00000523950 ORC6Q9Y5N6 252 aa10.78□□□□□ -0.68
VEGFA-225ENST00000523950 TVP23AA6NH52 213 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 SAC3D1A6NKF1 404 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 MITFO75030 526 aaPredicted RBP10.77□□□□□ -0.69
VEGFA-225ENST00000523950 IGHV3-13P01766 116 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 SPARCP09486 303 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 GSTT1P30711 240 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 LIPAP38571 399 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 RAD23AP54725 363 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 LCN1P1Q5VSP4 162 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 TMEM236Q5W0B7 351 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 OTPQ5XKR4 325 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 C12orf73Q69YU5 71 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 CLEC2AQ6UVW9 174 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 RHOUQ7L0Q8 258 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 CXXC5Q7LFL8 322 aaKnown RBP10.77□□□□□ -0.69
VEGFA-225ENST00000523950 SHFQ7M4L6 423 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 CPOQ8IVL8 374 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 PQLC1Q8N2U9 271 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 ZNF511Q8NB15 262 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 OR5L1Q8NGL2 311 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 SLC25A40Q8TBP6 338 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 SNX33Q8WV41 574 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 SPTSSAQ969W0 71 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 APOBEC3DQ96AK3 386 aaPredicted RBP10.77□□□□□ -0.69
VEGFA-225ENST00000523950 MARS2Q96GW9 593 aaKnown RBP10.77□□□□□ -0.69
VEGFA-225ENST00000523950 C9orf16Q9BUW7 83 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 HCAR1Q9BXC0 346 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 OR51V1Q9H2C8 321 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 WDR76Q9H967 626 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 PNRC2Q9NPJ4 139 aaKnown RBP10.77□□□□□ -0.69
VEGFA-225ENST00000523950 CYSLTR2Q9NS75 346 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 TVP23BQ9NYZ1 205 aa10.77□□□□□ -0.69
VEGFA-225ENST00000523950 ZNF878C9JN71 531 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 NDUFS8O00217 210 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 ZNF593O00488 134 aaPredicted RBP10.76□□□□□ -0.69
VEGFA-225ENST00000523950 SSX4O60224 188 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 NDUFS7O75251 213 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 ALPLP05186 524 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 ANPEPP15144 967 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 ALDH3A2P51648 485 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 TPTEP56180 551 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 ERVS71-1P61550 626 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 NKPD1Q17RQ9 610 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 ZMAT1Q5H9K5 638 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 LYPD4Q6UWN0 246 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 COLCA1Q6ZS62 124 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 DCXRQ7Z4W1 244 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 LRP11Q86VZ4 500 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 LURAP1LQ8IV03 231 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 TIGD4Q8IY51 512 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 OR6N2Q8NGY6 317 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 KLF14Q8TD94 323 aaPredicted RBP10.76□□□□□ -0.69
VEGFA-225ENST00000523950 MAP6Q96JE9 813 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 RHNO1Q9BSD3 238 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 OR2J1Q9GZK6 312 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 TOR3AQ9H497 397 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 MED20Q9H944 212 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 DLL4Q9NR61 685 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 TAAR3PQ9P1P4 343 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 FZR1Q9UM11 496 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 GRIP1Q9Y3R0 1128 aa10.76□□□□□ -0.69
VEGFA-225ENST00000523950 CHD3Q12873 2000 aaKnown RBP10.75□□□□□ -0.69
VEGFA-225ENST00000523950 MAGEA13PA6NCF6 341 aa10.75□□□□□ -0.69
VEGFA-225ENST00000523950 A6NHS1 94 aa10.75□□□□□ -0.69
VEGFA-225ENST00000523950 EI24O14681 340 aa10.75□□□□□ -0.69
VEGFA-225ENST00000523950 CLPTM1O96005 669 aa10.75□□□□□ -0.69
VEGFA-225ENST00000523950 NGFP01138 241 aa10.75□□□□□ -0.69
VEGFA-225ENST00000523950 APOC1P02654 83 aa10.75□□□□□ -0.69
VEGFA-225ENST00000523950 ADRA2AP08913 450 aa10.75□□□□□ -0.69
VEGFA-225ENST00000523950 DBHP09172 617 aa10.75□□□□□ -0.69
VEGFA-225ENST00000523950 ACSM4P0C7M7 580 aa10.75□□□□□ -0.69
VEGFA-225ENST00000523950 SLC2A5P22732 501 aa10.75□□□□□ -0.69
VEGFA-225ENST00000523950 OTX1P32242 354 aaPredicted RBP10.75□□□□□ -0.69
VEGFA-225ENST00000523950 SLC15A1P46059 708 aa10.75□□□□□ -0.69
VEGFA-225ENST00000523950 PDLIM4P50479 330 aa10.75□□□□□ -0.69
VEGFA-225ENST00000523950 RPS7P62081 194 aaKnown RBP10.75□□□□□ -0.69
VEGFA-225ENST00000523950 EFNB1P98172 346 aa10.75□□□□□ -0.69
VEGFA-225ENST00000523950 DBPQ10586 325 aaPredicted RBP10.75□□□□□ -0.69
VEGFA-225ENST00000523950 PCGF3Q3KNV8 242 aa10.75□□□□□ -0.69
VEGFA-225ENST00000523950 KLHL12Q53G59 568 aa10.75□□□□□ -0.69
VEGFA-225ENST00000523950 FAM209AQ5JX71 171 aa10.75□□□□□ -0.69
VEGFA-225ENST00000523950 NXNL2Q5VZ03 156 aa10.75□□□□□ -0.69
VEGFA-225ENST00000523950 TMEM154Q6P9G4 183 aa10.75□□□□□ -0.69
VEGFA-225ENST00000523950 ERI1Q8IV48 349 aaKnown RBP10.75□□□□□ -0.69
VEGFA-225ENST00000523950 GID4Q8IVV7 300 aa10.75□□□□□ -0.69
VEGFA-225ENST00000523950 ZNF454Q8N9F8 522 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms