RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 GSSP48637 474 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 CSNK1EP49674 416 aaKnown RBP3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 GFERP55789 205 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 ESRRGP62508 458 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 SRSF5Q13243 272 aaKnown RBP3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 DGCR6Q14129 220 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 GNA13Q14344 377 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 SNAPC1Q16533 368 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 DUSP5Q16690 384 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 DEFB133Q30KQ1 61 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 ARHGAP11BQ3KRB8 267 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 C14orf28Q4W4Y0 310 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 TRMT12Q53H54 448 aaKnown RBP3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 FGD3Q5JSP0 725 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 ATAD3BQ5T9A4 648 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 GPR107Q5VW38 600 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 C12orf73Q69YU5 71 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 OR4A47Q6IF82 309 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 PODNL1Q6PEZ8 512 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 DHRS4L2Q6PKH6 230 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 REG3GQ6UW15 175 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 C16orf54Q6UWD8 224 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 FAM198BQ6UWH4 519 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 DGAT2L6Q6ZPD8 337 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 FAM92BQ6ZTR7 304 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 C16orf62Q7Z3J2 963 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 VRK2Q86Y07 508 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 CLVS1Q8IUQ0 354 aaPredicted RBP3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 MORN4Q8NDC4 146 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 BPIFB6Q8NFQ5 453 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 OR6T1Q8NGN1 323 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 OR9A4Q8NGU2 314 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 ZNF420Q8TAQ5 688 aaPredicted RBP3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 FAM81AQ8TBF8 368 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 SLC7A13Q8TCU3 470 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 ZNF675Q8TD23 568 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 DOK4Q8TEW6 326 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 PIK3R3Q92569 461 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 CDS1Q92903 461 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 C12orf43Q96C57 262 aaKnown RBP3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 PRRC1Q96M27 445 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 ZNF285Q96NJ3 590 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 TRNT1Q96Q11 434 aaKnown RBP3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 ZNF350Q9GZX5 532 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 RAB33BQ9H082 229 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 DUSP21Q9H596 190 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 JPT2Q9H910 190 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 LIN28AQ9H9Z2 209 aaKnown RBP3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 CXorf21Q9HAI6 301 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 ANKHQ9HCJ1 492 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 TNFRSF19Q9NS68 423 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 FKBP14Q9NWM8 211 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 ZNF226Q9NYT6 803 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 MAT2BQ9NZL9 334 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 CALML5Q9NZT1 146 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 TMEM9Q9P0T7 183 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 ERVK-18Q9QC07 812 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 RNF150Q9ULK6 438 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 MGAT4BQ9UQ53 548 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 LIPT1Q9Y234 373 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 RNF6Q9Y252 685 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 ZNF443Q9Y2A4 671 aaPredicted RBP3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 SLC9A8Q9Y2E8 581 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 TPRKBQ9Y3C4 175 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 FAM32AQ9Y421 112 aaKnown RBP3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 KIF25-AS1Q9Y6Z4 181 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 SPACA6W5XKT8 324 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 MPDZO75970 2070 aa3.1□□□□□ -1.91
CTHRC1-204ENST00000520880 CACNA1EQ15878 2313 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 IGHV1OR21-1A0A087WYE8 117 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 A0A0A6YYC8 382 aaPredicted RBP3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 NPIPA5A0A0B4J1W7 369 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 IGHV3-20A0A0C4DH32 117 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 TLCD2A6NGC4 264 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 CLDN24A6NM45 220 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 CPSF4LA6NMK7 179 aaKnown RBP3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 A8MV72 311 aaPredicted RBP3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 ZNF99A8MXY4 864 aaPredicted RBP3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 NPIPA7E9PJI5 369 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 H3BMH7 237 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 I3L1I5 382 aaPredicted RBP3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 CCL24O00175 119 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 CHST10O43529 356 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 KIAA0513O60268 411 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 OR10H3O60404 316 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 PLOD3O60568 738 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 FCMRO60667 390 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 SRPX2O60687 465 aaPredicted RBP3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 MRPS14O60783 128 aaKnown RBP3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 BCAS1O75363 584 aaPredicted RBP3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 SOX14O95416 240 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 NSA2O95478 260 aaKnown RBP3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 FADS2O95864 444 aaKnown RBP3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 THY1P04216 161 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 IGFBP1P08833 259 aaPredicted RBP3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 ALOX5P09917 674 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 RAB40ALP0C0E4 278 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 SLC35E2P0CK97 266 aa3.09□□□□□ -1.91
CTHRC1-204ENST00000520880 GIMD1P0DJR0 217 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 1290 ms