RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 ZNF708P17019 499 aa23.8■■□□□ 1.4
COL13A1-212ENST00000520133 CLDN18P56856 261 aa23.8■■□□□ 1.4
COL13A1-212ENST00000520133 ZNF766Q5HY98 468 aa23.8■■□□□ 1.4
COL13A1-212ENST00000520133 LUZP2Q86TE4 346 aa23.8■■□□□ 1.4
COL13A1-212ENST00000520133 ZNF554Q86TJ5 538 aa23.8■■□□□ 1.4
COL13A1-212ENST00000520133 NABP1Q96AH0 204 aa23.8■■□□□ 1.4
COL13A1-212ENST00000520133 SCMH1Q96GD3 660 aa23.8■■□□□ 1.4
COL13A1-212ENST00000520133 NUFIP1Q9UHK0 495 aaKnown RBP23.8■■□□□ 1.4
COL13A1-212ENST00000520133 A0A1B0GVC2 190 aa23.8■■□□□ 1.4
COL13A1-212ENST00000520133 A6NIN4 97 aa23.8■■□□□ 1.4
COL13A1-212ENST00000520133 P2RY10O00398 339 aa23.8■■□□□ 1.4
COL13A1-212ENST00000520133 ACSM4P0C7M7 580 aa23.8■■□□□ 1.4
COL13A1-212ENST00000520133 CFPP27918 469 aa23.8■■□□□ 1.4
COL13A1-212ENST00000520133 CLDN12P56749 244 aa23.8■■□□□ 1.4
COL13A1-212ENST00000520133 MRPS34P82930 218 aaKnown RBP23.8■■□□□ 1.4
COL13A1-212ENST00000520133 SRYQ05066 204 aa23.8■■□□□ 1.4
COL13A1-212ENST00000520133 GPR137CQ8N3F9 429 aa23.8■■□□□ 1.4
COL13A1-212ENST00000520133 DTX3Q8N9I9 347 aa23.8■■□□□ 1.4
COL13A1-212ENST00000520133 STEAP1Q9UHE8 339 aa23.8■■□□□ 1.4
COL13A1-212ENST00000520133 CAMK2AQ9UQM7 478 aa23.8■■□□□ 1.4
COL13A1-212ENST00000520133 ACOT7O00154 380 aa23.79■■□□□ 1.4
COL13A1-212ENST00000520133 SRSF6Q13247 344 aaKnown RBP23.79■■□□□ 1.4
COL13A1-212ENST00000520133 ENDOGQ14249 297 aaKnown RBP23.79■■□□□ 1.4
COL13A1-212ENST00000520133 BCL2A1Q16548 175 aa23.79■■□□□ 1.4
COL13A1-212ENST00000520133 PNPLA5Q7Z6Z6 429 aaPredicted RBP23.79■■□□□ 1.4
COL13A1-212ENST00000520133 FAM109AQ8N4B1 249 aa23.79■■□□□ 1.4
COL13A1-212ENST00000520133 COL25A1Q9BXS0 654 aaPredicted RBP23.79■■□□□ 1.4
COL13A1-212ENST00000520133 HDHD2Q9H0R4 259 aa23.79■■□□□ 1.4
COL13A1-212ENST00000520133 C11orf54Q9H0W9 315 aaPredicted RBP23.79■■□□□ 1.4
COL13A1-212ENST00000520133 ACKR4Q9NPB9 350 aa23.79■■□□□ 1.4
COL13A1-212ENST00000520133 OR5V1Q9UGF6 321 aa23.79■■□□□ 1.4
COL13A1-212ENST00000520133 DOK2O60496 412 aa23.78■■□□□ 1.4
COL13A1-212ENST00000520133 SYNGR4O95473 234 aa23.78■■□□□ 1.4
COL13A1-212ENST00000520133 RFX2P48378 723 aa23.78■■□□□ 1.4
COL13A1-212ENST00000520133 PRKXP51817 358 aa23.78■■□□□ 1.4
COL13A1-212ENST00000520133 SLC10A1Q14973 349 aa23.78■■□□□ 1.4
COL13A1-212ENST00000520133 CMTM4Q8IZR5 234 aa23.78■■□□□ 1.4
COL13A1-212ENST00000520133 ABHD3Q8WU67 409 aa23.78■■□□□ 1.4
COL13A1-212ENST00000520133 RAB40AQ8WXH6 277 aa23.78■■□□□ 1.4
COL13A1-212ENST00000520133 RFT1Q96AA3 541 aa23.78■■□□□ 1.4
COL13A1-212ENST00000520133 THAP7Q9BT49 309 aaPredicted RBP23.78■■□□□ 1.4
COL13A1-212ENST00000520133 DDX28Q9NUL7 540 aaKnown RBP23.78■■□□□ 1.4
COL13A1-212ENST00000520133 MEGF11A6BM72 1044 aa23.77■■□□□ 1.4
COL13A1-212ENST00000520133 PLA2G10O15496 165 aa23.77■■□□□ 1.4
COL13A1-212ENST00000520133 SYT7O43581 403 aa23.77■■□□□ 1.4
COL13A1-212ENST00000520133 SSX4O60224 188 aa23.77■■□□□ 1.4
COL13A1-212ENST00000520133 IGFBP3P17936 291 aaPredicted RBP23.77■■□□□ 1.4
COL13A1-212ENST00000520133 CCL11P51671 97 aa23.77■■□□□ 1.4
COL13A1-212ENST00000520133 FAM27BQ5VT28 67 aa23.77■■□□□ 1.4
COL13A1-212ENST00000520133 GLT8D1Q68CQ7 371 aa23.77■■□□□ 1.4
COL13A1-212ENST00000520133 MZT2BQ6NZ67 158 aa23.77■■□□□ 1.4
COL13A1-212ENST00000520133 CADM3Q8N126 398 aa23.77■■□□□ 1.4
COL13A1-212ENST00000520133 CPT1CQ8TCG5 803 aa23.77■■□□□ 1.4
COL13A1-212ENST00000520133 TMEM45BQ96B21 275 aa23.77■■□□□ 1.4
COL13A1-212ENST00000520133 ABHD1Q96SE0 405 aa23.77■■□□□ 1.4
COL13A1-212ENST00000520133 ABCG5Q9H222 651 aa23.77■■□□□ 1.4
COL13A1-212ENST00000520133 TAS2R4Q9NYW5 299 aa23.77■■□□□ 1.4
COL13A1-212ENST00000520133 MCTS1Q9ULC4 181 aaKnown RBP23.77■■□□□ 1.4
COL13A1-212ENST00000520133 NTF4P34130 210 aa23.77■■□□□ 1.4
COL13A1-212ENST00000520133 RTP5Q14D33 572 aa23.77■■□□□ 1.4
COL13A1-212ENST00000520133 RIPPLY2Q5TAB7 128 aa23.77■■□□□ 1.4
COL13A1-212ENST00000520133 HACD4Q5VWC8 232 aa23.77■■□□□ 1.4
COL13A1-212ENST00000520133 ASPHD2Q6ICH7 369 aa23.77■■□□□ 1.4
COL13A1-212ENST00000520133 LRRC18Q8N456 261 aa23.77■■□□□ 1.4
COL13A1-212ENST00000520133 ZNF283Q8N7M2 679 aa23.77■■□□□ 1.4
COL13A1-212ENST00000520133 S100A16Q96FQ6 103 aaKnown RBP23.77■■□□□ 1.4
COL13A1-212ENST00000520133 CRLF2Q9HC73 371 aa23.77■■□□□ 1.4
COL13A1-212ENST00000520133 DLL3Q9NYJ7 618 aa23.77■■□□□ 1.4
COL13A1-212ENST00000520133 CDV3Q9UKY7 258 aaKnown RBP23.77■■□□□ 1.4
COL13A1-212ENST00000520133 MRPS7Q9Y2R9 242 aaKnown RBP23.77■■□□□ 1.4
COL13A1-212ENST00000520133 IGKV3D-15A0A087WSY6 115 aa23.76■■□□□ 1.39
COL13A1-212ENST00000520133 A0A1B0GVI7 797 aa23.76■■□□□ 1.39
COL13A1-212ENST00000520133 ACTL6AO96019 429 aa23.76■■□□□ 1.39
COL13A1-212ENST00000520133 CTSSP25774 331 aa23.76■■□□□ 1.39
COL13A1-212ENST00000520133 CX3CR1P49238 355 aa23.76■■□□□ 1.39
COL13A1-212ENST00000520133 MMP15P51511 669 aa23.76■■□□□ 1.39
COL13A1-212ENST00000520133 ART1P52961 327 aa23.76■■□□□ 1.39
COL13A1-212ENST00000520133 ZNF57Q68EA5 555 aaPredicted RBP23.76■■□□□ 1.39
COL13A1-212ENST00000520133 ZNF275Q9NSD4 429 aaPredicted RBP23.76■■□□□ 1.39
COL13A1-212ENST00000520133 FAM186AA6NE01 2351 aa23.76■■□□□ 1.39
COL13A1-212ENST00000520133 HNRNPCP07910 306 aaKnown RBP eCLIP23.75■■□□□ 1.39
COL13A1-212ENST00000520133 TNFSF10P50591 281 aa23.75■■□□□ 1.39
COL13A1-212ENST00000520133 ZNF121P58317 390 aaPredicted RBP23.75■■□□□ 1.39
COL13A1-212ENST00000520133 HIST1H3AP68431 136 aa23.75■■□□□ 1.39
COL13A1-212ENST00000520133 HIST2H3PS2Q5TEC6 136 aa23.75■■□□□ 1.39
COL13A1-212ENST00000520133 HIST2H3AQ71DI3 136 aa23.75■■□□□ 1.39
COL13A1-212ENST00000520133 SYNPRQ8TBG9 265 aa23.75■■□□□ 1.39
COL13A1-212ENST00000520133 SLC25A38Q96DW6 304 aa23.75■■□□□ 1.39
COL13A1-212ENST00000520133 EMC3Q9P0I2 261 aa23.75■■□□□ 1.39
COL13A1-212ENST00000520133 GVINP1Q7Z2Y8 2422 aa23.75■■□□□ 1.39
COL13A1-212ENST00000520133 ZNF837Q96EG3 531 aaPredicted RBP23.75■■□□□ 1.39
COL13A1-212ENST00000520133 ETAA1Q9NY74 926 aa23.75■■□□□ 1.39
COL13A1-212ENST00000520133 NOSIPQ9Y314 301 aaKnown RBP23.75■■□□□ 1.39
COL13A1-212ENST00000520133 ZNF891A8MT65 544 aaPredicted RBP23.74■■□□□ 1.39
COL13A1-212ENST00000520133 SLC17A2O00624 439 aa23.74■■□□□ 1.39
COL13A1-212ENST00000520133 CTDSPLO15194 276 aa23.74■■□□□ 1.39
COL13A1-212ENST00000520133 WT1P19544 449 aaPredicted RBP23.74■■□□□ 1.39
COL13A1-212ENST00000520133 MAP2K3P46734 347 aa23.74■■□□□ 1.39
COL13A1-212ENST00000520133 GALK2Q01415 458 aa23.74■■□□□ 1.39
COL13A1-212ENST00000520133 RAB11BQ15907 218 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms