RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 ZNF879B4DU55 563 aa9.4□□□□□ -0.9
CTNNA1-205ENST00000517904 H7C1C5 153 aa9.4□□□□□ -0.9
CTNNA1-205ENST00000517904 SGCEO43556 437 aa9.4□□□□□ -0.9
CTNNA1-205ENST00000517904 ENSAO43768 121 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-205ENST00000517904 PIP5K1CO60331 668 aa9.4□□□□□ -0.9
CTNNA1-205ENST00000517904 TNFRSF1BP20333 461 aa9.4□□□□□ -0.9
CTNNA1-205ENST00000517904 PSMB10P40306 273 aa9.4□□□□□ -0.9
CTNNA1-205ENST00000517904 RBM34P42696 430 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-205ENST00000517904 SRP9P49458 86 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-205ENST00000517904 MTPNP58546 118 aa9.4□□□□□ -0.9
CTNNA1-205ENST00000517904 LCN6P62502 163 aa9.4□□□□□ -0.9
CTNNA1-205ENST00000517904 SAMD5Q5TGI4 173 aa9.4□□□□□ -0.9
CTNNA1-205ENST00000517904 OTPQ5XKR4 325 aa9.4□□□□□ -0.9
CTNNA1-205ENST00000517904 DCDC5Q6ZRR9 648 aa9.4□□□□□ -0.9
CTNNA1-205ENST00000517904 OR8G5Q8NG78 346 aa9.4□□□□□ -0.9
CTNNA1-205ENST00000517904 MAGEB18Q96M61 343 aa9.4□□□□□ -0.9
CTNNA1-205ENST00000517904 EBF4Q9BQW3 602 aa9.4□□□□□ -0.9
CTNNA1-205ENST00000517904 PTTG3PQ9NZH4 202 aa9.4□□□□□ -0.9
CTNNA1-205ENST00000517904 CTSZQ9UBR2 303 aa9.4□□□□□ -0.9
CTNNA1-205ENST00000517904 OR6C6A6NF89 314 aa9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 LRRC30A6NM36 301 aa9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 P2RY10O00398 339 aa9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 SHOX2O60902 331 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 TOX4O94842 621 aa9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 DBHP09172 617 aa9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 CSF1P09603 554 aa9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 GUCA1AP43080 201 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 SCRN3Q0VDG4 424 aa9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 PIN1Q13526 163 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 FBXW12Q6X9E4 464 aa9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 PATL1Q86TB9 770 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 LDLRAD3Q86YD5 345 aa9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 LRRC75AQ8NAA5 344 aa9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 BHLHE23Q8NDY6 225 aa9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 OR13G1Q8NGZ3 307 aa9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 FNDC8Q8TC99 324 aa9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 COG8Q96MW5 612 aa9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 WDFY2Q96P53 400 aa9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 TECTBQ96PL2 329 aa9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 TRIM15Q9C019 465 aa9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 SIRPDQ9H106 197 aa9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 C16orf95Q9H693 158 aa9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 RIMS3Q9UJD0 308 aa9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 SH3GLB1Q9Y371 365 aa9.39□□□□□ -0.91
CTNNA1-205ENST00000517904 IGHV1-69DA0A0B4J2H0 117 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 A0A1B0GWJ7 208 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 FBP2O00757 339 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 POLR3GO15318 223 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 FCN3O75636 299 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 OR5F1O95221 314 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 IGHV1-69P01742 117 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 HLA-DPB1P04440 258 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 GATA4P43694 442 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 IDH3AP50213 366 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 TAS2R41P59536 307 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 CTXN1P60606 82 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 MAB21L1Q13394 359 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 FHL1Q13642 323 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 FAM189A2Q15884 450 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 AGKQ53H12 422 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 CLEC12AQ5QGZ9 265 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 WDR93Q6P2C0 686 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 PDZD9Q8IXQ8 264 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 C1orf87Q8N0U7 546 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 PCYOX1LQ8NBM8 494 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 LRRC8CQ8TDW0 803 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 SLC26A7Q8TE54 656 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 LHX4Q969G2 390 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 ZNF582Q96NG8 517 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 WACQ9BTA9 647 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 KAT8Q9H7Z6 458 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 SMURF1Q9HCE7 757 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 KIF17Q9P2E2 1029 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 TMCC3Q9ULS5 477 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 MED31Q9Y3C7 131 aa9.38□□□□□ -0.91
CTNNA1-205ENST00000517904 TRAV27A0A087WT01 109 aa9.37□□□□□ -0.91
CTNNA1-205ENST00000517904 ZNF816-ZNF321PA0A0X1KG74 233 aa9.37□□□□□ -0.91
CTNNA1-205ENST00000517904 IQCF6A8MYZ5 107 aa9.37□□□□□ -0.91
CTNNA1-205ENST00000517904 J3QW42 95 aa9.37□□□□□ -0.91
CTNNA1-205ENST00000517904 TSPAN9O75954 239 aa9.37□□□□□ -0.91
CTNNA1-205ENST00000517904 OPN1MWP04001 364 aa9.37□□□□□ -0.91
CTNNA1-205ENST00000517904 OPN1MW2P0DN77 364 aa9.37□□□□□ -0.91
CTNNA1-205ENST00000517904 OPN1MW3P0DN78 364 aa9.37□□□□□ -0.91
CTNNA1-205ENST00000517904 FUT4P22083 530 aa9.37□□□□□ -0.91
CTNNA1-205ENST00000517904 NPY4RP50391 375 aa9.37□□□□□ -0.91
CTNNA1-205ENST00000517904 PRSS12P56730 875 aa9.37□□□□□ -0.91
CTNNA1-205ENST00000517904 EGR3Q06889 387 aa9.37□□□□□ -0.91
CTNNA1-205ENST00000517904 CCDC92Q53HC0 331 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-205ENST00000517904 GDPGP1Q6ZNW5 385 aa9.37□□□□□ -0.91
CTNNA1-205ENST00000517904 DHDDSQ86SQ9 333 aa9.37□□□□□ -0.91
CTNNA1-205ENST00000517904 MICU2Q8IYU8 434 aa9.37□□□□□ -0.91
CTNNA1-205ENST00000517904 OR1F12Q8NHA8 337 aa9.37□□□□□ -0.91
CTNNA1-205ENST00000517904 Q8TCH9 128 aa9.37□□□□□ -0.91
CTNNA1-205ENST00000517904 RASD2Q96D21 266 aa9.37□□□□□ -0.91
CTNNA1-205ENST00000517904 BPIFA2Q96DR5 249 aa9.37□□□□□ -0.91
CTNNA1-205ENST00000517904 CGREF1Q99674 301 aa9.37□□□□□ -0.91
CTNNA1-205ENST00000517904 SEMA6AQ9H2E6 1030 aa9.37□□□□□ -0.91
CTNNA1-205ENST00000517904 MMADHCQ9H3L0 296 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-205ENST00000517904 WDR76Q9H967 626 aa9.37□□□□□ -0.91
CTNNA1-205ENST00000517904 A6NIZ1 184 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms