RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 TERTO14746 1132 aaKnown RBP6.62□□□□□ -1.35
CLIP1-205ENST00000514271 PGRMC2O15173 223 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 HMGN2P05204 90 aaKnown RBP6.62□□□□□ -1.35
CLIP1-205ENST00000514271 RBMS2Q15434 407 aaKnown RBP6.62□□□□□ -1.35
CLIP1-205ENST00000514271 TMEM268Q5VZI3 342 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 LPCAT3Q6P1A2 487 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 ZNF613Q6PF04 617 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 STAC2Q6ZMT1 411 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 C17orf107Q6ZR85 190 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 PGAP1Q75T13 922 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 CHMP1BQ7LBR1 199 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 OR2W3Q7Z3T1 314 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 NRMQ8IXM6 262 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 C9orf40Q8IXQ3 194 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 OR5AP2Q8NGF4 316 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 SLC35G5Q96KT7 338 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 CCNL2Q96S94 520 aaPredicted RBP6.62□□□□□ -1.35
CLIP1-205ENST00000514271 FNDC11Q9BVV2 318 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 KLHL1Q9NR64 748 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 FRRS1LQ9P0K9 344 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 ZNF230Q9UIE0 474 aaPredicted RBP6.62□□□□□ -1.35
CLIP1-205ENST00000514271 ZNF222Q9UK12 451 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 PPIEQ9UNP9 301 aaKnown RBP6.62□□□□□ -1.35
CLIP1-205ENST00000514271 C9JQL5 133 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 ARPC1BO15143 372 aaKnown RBP6.62□□□□□ -1.35
CLIP1-205ENST00000514271 SIGLEC5O15389 551 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 EMC8O43402 210 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 OR1F1O43749 312 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 B3GALT2O43825 422 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 PRAMEF2O60811 474 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 WNT11O96014 354 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 FBP1P09467 338 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 RNH1P13489 461 aaKnown RBP6.62□□□□□ -1.35
CLIP1-205ENST00000514271 HTR5AP47898 357 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 SOX8P57073 446 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 RAB38P57729 211 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 RAC3P60763 192 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 RNF4P78317 190 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 LUZP2Q86TE4 346 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 SULF2Q8IWU5 870 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 TMEM229BQ8NBD8 167 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 PLPP5Q8NEB5 264 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 OR56A1Q8NGH5 318 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 NKD1Q969G9 470 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 PIK3IP1Q96FE7 263 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 MRPL48Q96GC5 212 aaKnown RBP6.62□□□□□ -1.35
CLIP1-205ENST00000514271 C12orf57Q99622 126 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 KLHDC2Q9Y2U9 406 aa6.62□□□□□ -1.35
CLIP1-205ENST00000514271 A0A0D9SG52 128 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 MED19A0JLT2 244 aaPredicted RBP6.61□□□□□ -1.35
CLIP1-205ENST00000514271 OR4C45A6NMZ5 311 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 H3BN98 237 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 SAP18O00422 153 aaKnown RBP6.61□□□□□ -1.35
CLIP1-205ENST00000514271 NDUFS4O43181 175 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 RP2O75695 350 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 SLC25A12O75746 678 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 ZFPL1O95159 310 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 OR8U8P0C7N1 319 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 BCL6P41182 706 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 FOLR3P41439 243 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 GUCA2AQ02747 115 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 MRPL14Q6P1L8 145 aaKnown RBP6.61□□□□□ -1.35
CLIP1-205ENST00000514271 ALKAL2Q6UX46 152 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 SLC25A42Q86VD7 318 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 OR1M1Q8NGA1 313 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 ZPLD1Q8TCW7 415 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 ADAMTS17Q8TE56 1095 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 SFT2D1Q8WV19 159 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 FER1L6-AS2Q96M78 137 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 PRAP1Q96NZ9 151 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 SLC35D1Q9NTN3 355 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 CACFD1Q9UGQ2 172 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 FARSAQ9Y285 508 aaKnown RBP6.61□□□□□ -1.35
CLIP1-205ENST00000514271 STARD10Q9Y365 291 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 B3GALT1Q9Y5Z6 326 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 SERTM2A0A1B0GWG4 89 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 XKRY2A2RUG3 117 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 NDUFS8O00217 210 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 NID1P14543 1247 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 CAMLGP49069 296 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 CLN3Q13286 438 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 NKAIN1Q4KMZ8 207 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 SLC25A25Q6KCM7 469 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 C11orf87Q6NUJ2 197 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 VN1R4Q7Z5H5 301 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 SYT9Q86SS6 491 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 PDZD9Q8IXQ8 264 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 OR7G2Q8NG99 324 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 OR2Y1Q8NGV0 311 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 PIGXQ8TBF5 258 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 GCDHQ92947 438 aaPredicted RBP6.61□□□□□ -1.35
CLIP1-205ENST00000514271 DACT3Q96B18 629 aaPredicted RBP6.61□□□□□ -1.35
CLIP1-205ENST00000514271 F2RL3Q96RI0 385 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 STACQ99469 402 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 SDF2Q99470 211 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 LMF2Q9BU23 707 aaKnown RBP6.61□□□□□ -1.35
CLIP1-205ENST00000514271 PTDSS2Q9BVG9 487 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 TLNRD1Q9H1K6 362 aa6.61□□□□□ -1.35
CLIP1-205ENST00000514271 CLEC4MQ9H2X3 399 aaPredicted RBP6.61□□□□□ -1.35
CLIP1-205ENST00000514271 OR51M1Q9H341 326 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms