RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 Q6ZSR3 168 aa7.39□□□□□ -1.23
RNF4-220ENST00000513578 AAED1Q7RTV5 226 aa7.39□□□□□ -1.23
RNF4-220ENST00000513578 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.39□□□□□ -1.23
RNF4-220ENST00000513578 SNX29P2Q8IUI4 249 aa7.39□□□□□ -1.23
RNF4-220ENST00000513578 GPR137CQ8N3F9 429 aa7.39□□□□□ -1.23
RNF4-220ENST00000513578 SAMD12Q8N8I0 201 aa7.39□□□□□ -1.23
RNF4-220ENST00000513578 POC5Q8NA72 575 aa7.39□□□□□ -1.23
RNF4-220ENST00000513578 OR10AC1Q8NH08 325 aa7.39□□□□□ -1.23
RNF4-220ENST00000513578 RAB40AQ8WXH6 277 aa7.39□□□□□ -1.23
RNF4-220ENST00000513578 ABTB1Q969K4 478 aaPredicted RBP7.39□□□□□ -1.23
RNF4-220ENST00000513578 TMEM106AQ96A25 262 aa7.39□□□□□ -1.23
RNF4-220ENST00000513578 MARVELD3Q96A59 401 aa7.39□□□□□ -1.23
RNF4-220ENST00000513578 HES7Q9BYE0 225 aa7.39□□□□□ -1.23
RNF4-220ENST00000513578 ULBP2Q9BZM5 246 aa7.39□□□□□ -1.23
RNF4-220ENST00000513578 ABCG5Q9H222 651 aa7.39□□□□□ -1.23
RNF4-220ENST00000513578 ZDHHC11Q9H8X9 412 aa7.39□□□□□ -1.23
RNF4-220ENST00000513578 BCO1Q9HAY6 547 aa7.39□□□□□ -1.23
RNF4-220ENST00000513578 EMC7Q9NPA0 242 aa7.39□□□□□ -1.23
RNF4-220ENST00000513578 PARPBPQ9NWS1 579 aa7.39□□□□□ -1.23
RNF4-220ENST00000513578 EXTL2Q9UBQ6 330 aa7.39□□□□□ -1.23
RNF4-220ENST00000513578 FBXL3Q9UKT7 428 aa7.39□□□□□ -1.23
RNF4-220ENST00000513578 TBC1D24Q9ULP9 559 aa7.39□□□□□ -1.23
RNF4-220ENST00000513578 DHDHQ9UQ10 334 aa7.39□□□□□ -1.23
RNF4-220ENST00000513578 EMC9Q9Y3B6 208 aa7.39□□□□□ -1.23
RNF4-220ENST00000513578 ASPMQ8IZT6 3477 aa7.39□□□□□ -1.23
RNF4-220ENST00000513578 FRYLO94915 3013 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 A0A087WV48 116 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 LOC390937A0A1W2PQ73 354 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 FAM25AB3EWG3 89 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 FAM25CB3EWG5 89 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 FAM25GB3EWG6 89 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 RPL36A-HNRNPH2H7BZ11 118 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 SULT1B1O43704 296 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 GSTZ1O43708 216 aaPredicted RBP7.38□□□□□ -1.23
RNF4-220ENST00000513578 UBL3O95164 117 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 SYNGR4O95473 234 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 IGLV3-1P01715 115 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 IGHG3P01860 377 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 CELA3AP09093 270 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 ACSM4P0C7M7 580 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 CDAP32320 146 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 NTF4P34130 210 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 MAGEB1P43366 347 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 SOX2P48431 317 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 PITPNBP48739 271 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 MMP15P51511 669 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 BCAP31P51572 246 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 CAPZA1P52907 286 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 ARG2P78540 354 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 ECH1Q13011 328 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 IL18Q14116 193 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 RNPS1Q15287 305 aaKnown RBP7.38□□□□□ -1.23
RNF4-220ENST00000513578 C11orf91Q3C1V1 193 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 PYDC2Q56P42 97 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 OTPQ5XKR4 325 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 ASPHD2Q6ICH7 369 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 ZNF529Q6P280 563 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 CORO6Q6QEF8 472 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 GDPD3Q7L5L3 318 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 ZNF627Q7L945 461 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 PRSS45Q7RTY3 260 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 VASH2Q86V25 355 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 LYPD6Q86Y78 171 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 CDH26Q8IXH8 852 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 UBQLNLQ8IYU4 475 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 RDH10Q8IZV5 341 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 OR8H2Q8N162 312 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 Q8N402 240 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 OR4M1Q8NGD0 313 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 OR51A4Q8NGJ6 313 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 OR5H6Q8NGV6 325 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 C15orf40Q8WUR7 153 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 CHAC2Q8WUX2 184 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 TSEN15Q8WW01 171 aaKnown RBP7.38□□□□□ -1.23
RNF4-220ENST00000513578 ROBO4Q8WZ75 1007 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 FOXRED1Q96CU9 486 aaPredicted RBP7.38□□□□□ -1.23
RNF4-220ENST00000513578 ZC3HAV1LQ96H79 300 aaKnown RBP7.38□□□□□ -1.23
RNF4-220ENST00000513578 ZNF416Q9BWM5 594 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 PBOV1Q9GZY1 135 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 BRD7Q9NPI1 651 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 SLC17A5Q9NRA2 495 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 ZNF275Q9NSD4 429 aaPredicted RBP7.38□□□□□ -1.23
RNF4-220ENST00000513578 CENPMQ9NSP4 180 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 TMEM38BQ9NVV0 291 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 EMC3Q9P0I2 261 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 ASH2LQ9UBL3 628 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 CKLFQ9UBR5 152 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 STEAP1Q9UHE8 339 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 CAMK2AQ9UQM7 478 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 POLR1DQ9Y2S0 133 aa7.38□□□□□ -1.23
RNF4-220ENST00000513578 DNAJC13O75165 2243 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 TRAV8-7A0A075B6U6 113 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 TRAV17A0A0B4J275 112 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 A0A0U1RQV5 110 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 A0A1B0GTI1 187 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 A0A1B0GVC2 190 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 LOC107986453A0A1B0GWG9 222 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 A0A1W2PQ09 198 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 FUOMA2VDF0 154 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 ANXA2P2A6NMY6 339 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms