RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, human

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3TC1-223	ENST00000513495	FAM220A	Q7Z4H9	259 aa		13.65	□□□□□ -0.22
SH3TC1-223	ENST00000513495	ZNF584	Q8IVC4	421 aa		13.65	□□□□□ -0.22
SH3TC1-223	ENST00000513495	C1orf174	Q8IYL3	243 aa		13.65	□□□□□ -0.22
SH3TC1-223	ENST00000513495	ZNF540	Q8NDQ6	660 aa		13.65	□□□□□ -0.22
SH3TC1-223	ENST00000513495	SNX33	Q8WV41	574 aa		13.65	□□□□□ -0.22
SH3TC1-223	ENST00000513495	POM121L2	Q96KW2	1035 aa		13.65	□□□□□ -0.22
SH3TC1-223	ENST00000513495	COG8	Q96MW5	612 aa		13.65	□□□□□ -0.22
SH3TC1-223	ENST00000513495	ZNF75A	Q96N20	296 aa		13.65	□□□□□ -0.22
SH3TC1-223	ENST00000513495	TBX5	Q99593	518 aa		13.65	□□□□□ -0.22
SH3TC1-223	ENST00000513495	MRPS18A	Q9NVS2	196 aa	Known RBP	13.65	□□□□□ -0.22
SH3TC1-223	ENST00000513495	CNOT2	Q9NZN8	540 aa	Known RBP	13.65	□□□□□ -0.22
SH3TC1-223	ENST00000513495	ATP23	Q9Y6H3	246 aa		13.65	□□□□□ -0.22
SH3TC1-223	ENST00000513495	HEATR1	Q9H583	2144 aa	Known RBP	13.64	□□□□□ -0.23
SH3TC1-223	ENST00000513495	ATP6V1G2-DDX39B	F2Z307	99 aa		13.64	□□□□□ -0.23
SH3TC1-223	ENST00000513495		F5H5K5	113 aa		13.64	□□□□□ -0.23
SH3TC1-223	ENST00000513495	ABHD16A	O95870	558 aa		13.64	□□□□□ -0.23
SH3TC1-223	ENST00000513495	PIP	P12273	146 aa	Predicted RBP	13.64	□□□□□ -0.23
SH3TC1-223	ENST00000513495	COL8A1	P27658	744 aa		13.64	□□□□□ -0.23
SH3TC1-223	ENST00000513495	DCK	P27707	260 aa		13.64	□□□□□ -0.23
SH3TC1-223	ENST00000513495	HCCS	P53701	268 aa		13.64	□□□□□ -0.23
SH3TC1-223	ENST00000513495	ADAM5	Q6NVV9	412 aa		13.64	□□□□□ -0.23
SH3TC1-223	ENST00000513495	ZNF704	Q6ZNC4	412 aa	Predicted RBP	13.64	□□□□□ -0.23
SH3TC1-223	ENST00000513495	TMEM200A	Q86VY9	491 aa		13.64	□□□□□ -0.23
SH3TC1-223	ENST00000513495	ZNF786	Q8N393	782 aa		13.64	□□□□□ -0.23
SH3TC1-223	ENST00000513495	STX19	Q8N4C7	294 aa		13.64	□□□□□ -0.23
SH3TC1-223	ENST00000513495	SMAP2	Q8WU79	429 aa	Predicted RBP	13.64	□□□□□ -0.23
SH3TC1-223	ENST00000513495	MYDGF	Q969H8	173 aa		13.64	□□□□□ -0.23
SH3TC1-223	ENST00000513495	MARVELD3	Q96A59	401 aa		13.64	□□□□□ -0.23
SH3TC1-223	ENST00000513495	C14orf79	Q96F83	325 aa		13.64	□□□□□ -0.23
SH3TC1-223	ENST00000513495	KCNJ15	Q99712	375 aa		13.64	□□□□□ -0.23
SH3TC1-223	ENST00000513495	GRIP1	Q9Y3R0	1128 aa		13.64	□□□□□ -0.23
SH3TC1-223	ENST00000513495	PKDREJ	Q9NTG1	2253 aa		13.64	□□□□□ -0.23
SH3TC1-223	ENST00000513495	LOC100509620	A0A075B734	347 aa		13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495		A0A1W2PQL4	384 aa	Predicted RBP	13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495		J3QW42	95 aa		13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495		M0R135	149 aa		13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	SLC1A7	O00341	560 aa		13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	TACSTD2	P09758	323 aa		13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	CCDC159	P0C7I6	412 aa		13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	CCL2	P13500	99 aa		13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	ZNF35	P13682	527 aa		13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	PCSK6	P29122	969 aa		13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	RIDA	P52758	137 aa	Known RBP	13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	ROM1	Q03395	351 aa		13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	TLE4	Q04727	773 aa		13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	ZNF829	Q3KNS6	432 aa	Predicted RBP	13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	RBM48	Q5RL73	367 aa	Known RBP	13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	DRAM2	Q6UX65	266 aa		13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	MYPOP	Q86VE0	399 aa	Predicted RBP	13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	ZNF679	Q8IYX0	411 aa		13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	ZNF283	Q8N7M2	679 aa		13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	OR52I1	Q8NGK6	324 aa		13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	OR5L1	Q8NGL2	311 aa		13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	ZNF799	Q96GE5	643 aa		13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	TMEM80	Q96HE8	168 aa		13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	C4orf45	Q96LM5	186 aa		13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	OR8B4	Q96RC9	309 aa		13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	BCL2L14	Q9BZR8	327 aa		13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	FGF20	Q9NP95	211 aa	Predicted RBP	13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	PNRC2	Q9NPJ4	139 aa	Known RBP	13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	PSORS1C1	Q9UIG5	152 aa		13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	KLHDC2	Q9Y2U9	406 aa		13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	EXOSC1	Q9Y3B2	195 aa	Known RBP	13.63	□□□□□ -0.23
SH3TC1-223	ENST00000513495	XPNPEP2	O43895	674 aa		13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	CTAG2	O75638	210 aa		13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	SULT1C4	O75897	302 aa		13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	PSKH1	P11801	424 aa		13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	TUBG1	P23258	451 aa		13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	OPRL1	P41146	370 aa		13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	SPOCK1	Q08629	439 aa		13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	ST3GAL4	Q11206	333 aa		13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	SNTB2	Q13425	540 aa	Known RBP	13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	ZNF544	Q6NX49	715 aa		13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	LRRN1	Q6UXK5	716 aa		13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	TMPRSS11A	Q6ZMR5	421 aa		13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	AHSA2	Q719I0	299 aa		13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	KCTD20	Q7Z5Y7	419 aa		13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	YIPF7	Q8N8F6	280 aa		13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	OR10S1	Q8NGN2	331 aa		13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	APOBEC3D	Q96AK3	386 aa	Predicted RBP	13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	TMEM204	Q9BSN7	226 aa		13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	TTTY10	Q9BZA0	68 aa		13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	CLEC4M	Q9H2X3	399 aa	Predicted RBP	13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	TUBG2	Q9NRH3	451 aa		13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	FAIM	Q9NVQ4	179 aa		13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	DIMT1	Q9UNQ2	313 aa	Known RBP	13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	COPS3	Q9UNS2	423 aa		13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	PRR14L	Q5THK1	2151 aa		13.62	□□□□□ -0.23
SH3TC1-223	ENST00000513495	METTL15	A6NJ78	407 aa		13.61	□□□□□ -0.23
SH3TC1-223	ENST00000513495	PTGES3L	E9PB15	166 aa		13.61	□□□□□ -0.23
SH3TC1-223	ENST00000513495		J3QRE1	110 aa		13.61	□□□□□ -0.23
SH3TC1-223	ENST00000513495	SIAH2	O43255	324 aa		13.61	□□□□□ -0.23
SH3TC1-223	ENST00000513495	IGHA1	P01876	353 aa		13.61	□□□□□ -0.23
SH3TC1-223	ENST00000513495	LCAT	P04180	440 aa		13.61	□□□□□ -0.23
SH3TC1-223	ENST00000513495	LCK	P06239	509 aa		13.61	□□□□□ -0.23
SH3TC1-223	ENST00000513495	FAM157B	P0CG42	384 aa		13.61	□□□□□ -0.23
SH3TC1-223	ENST00000513495	NR4A1	P22736	598 aa		13.61	□□□□□ -0.23
SH3TC1-223	ENST00000513495	EEF1B2	P24534	225 aa	Known RBP	13.61	□□□□□ -0.23
SH3TC1-223	ENST00000513495	CALCR	P30988	508 aa		13.61	□□□□□ -0.23
SH3TC1-223	ENST00000513495	DCTD	P32321	178 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms