RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 TRIP11Q15643 1979 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 CEP250Q9BV73 2442 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 OR6C6A6NF89 314 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 ZNF724A8MTY0 619 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 PTP4A3O75365 173 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 SCRG1O75711 98 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 ZFAND5O76080 213 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 H2AFB1P0C5Y9 115 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 ITGB8P26012 769 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 CD27P26842 260 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 DAP3P51398 398 aaKnown RBP10.24□□□□□ -0.77
TCOF1-211ENST00000513346 ARHGAP11BQ3KRB8 267 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 SHEQ5VZ18 495 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 ADIPOR2Q86V24 386 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 ZNF595Q8IYB9 648 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 FAM24BQ8N5W8 94 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 CLEC1AQ8NC01 280 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 OR56B2PQ8NGI1 322 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 OR2G3Q8NGZ4 309 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 C2orf50Q96LR7 162 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 OR5B2Q96R09 309 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 MMP17Q9ULZ9 603 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 MRPS28Q9Y2Q9 187 aaKnown RBP10.24□□□□□ -0.77
TCOF1-211ENST00000513346 HS3ST3A1Q9Y663 406 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 SCN4AP35499 1836 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 NSG1A0A0A6YYJ2 146 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 CDC14CA4D256 554 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 BTBD17A6NE02 478 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 FFAR1O14842 300 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 CTNSO60931 367 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 HOXC8P31273 242 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 ECI1P42126 302 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 ATP1B3P54709 279 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 B2MP61769 119 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 H3F3AP84243 136 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 DUSP8Q13202 625 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 ZNF74Q16587 644 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 C17orf47Q8NEP4 570 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 OR13C8Q8NGS7 320 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 FGF21Q9NSA1 209 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 ZNF275Q9NSD4 429 aaPredicted RBP10.23□□□□□ -0.77
TCOF1-211ENST00000513346 B3GALT5Q9Y2C3 310 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 EMC9Q9Y3B6 208 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 DOCK5Q9H7D0 1870 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 LINC01565O15544 149 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 CYB5BO43169 146 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 MPC2O95563 127 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 FGF7P21781 194 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 GABRR1P24046 479 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 TSFMP43897 325 aaKnown RBP10.23□□□□□ -0.77
TCOF1-211ENST00000513346 ADPRHP54922 357 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 MRPS34P82930 218 aaKnown RBP10.23□□□□□ -0.77
TCOF1-211ENST00000513346 FOXK1P85037 733 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 MAT1AQ00266 395 aaKnown RBP10.23□□□□□ -0.77
TCOF1-211ENST00000513346 TFF2Q03403 129 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 DHRS2Q13268 280 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 TAF9Q16594 264 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 LAMTOR1Q6IAA8 161 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 RBMS3Q6XE24 437 aaKnown RBP10.23□□□□□ -0.77
TCOF1-211ENST00000513346 OR2L13Q8N349 312 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 PRSS35Q8N3Z0 413 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 SPEM1Q8N4L4 309 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 OR51Q1Q8NH59 317 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 OR1E3Q8WZA6 343 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 PELI1Q96FA3 418 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 RBM24Q9BX46 236 aaKnown RBP10.23□□□□□ -0.77
TCOF1-211ENST00000513346 PLEKHA2Q9HB19 425 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 MBNL1Q9NR56 388 aaKnown RBP10.23□□□□□ -0.77
TCOF1-211ENST00000513346 A0A1W2PR48 441 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 BLACEA4D250 179 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 FOLR1P15328 257 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 TBPP20226 339 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 C5orf46Q6UWT4 87 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 TMEM91Q6ZNR0 172 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 UBQLN4Q9NRR5 601 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 RASL12Q9NYN1 266 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 KLHL13Q9P2N7 655 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 OR5V1Q9UGF6 321 aa10.23□□□□□ -0.77
TCOF1-211ENST00000513346 OR6C68A6NDL8 312 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 A6NLC8 198 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 SCAF4O95104 1147 aaKnown RBP10.22□□□□□ -0.77
TCOF1-211ENST00000513346 SERPINE2P07093 398 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 EPHA1P21709 976 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 G0S2P27469 103 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 RAB38P57729 211 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 UBE2NP61088 152 aaKnown RBP10.22□□□□□ -0.77
TCOF1-211ENST00000513346 PPIAP62937 165 aaKnown RBP10.22□□□□□ -0.77
TCOF1-211ENST00000513346 RBMXL1Q96E39 390 aaKnown RBP10.22□□□□□ -0.77
TCOF1-211ENST00000513346 MAP3K3Q99759 626 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 ARHGDIGQ99819 225 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 TINAGL1Q9GZM7 467 aaPredicted RBP10.22□□□□□ -0.77
TCOF1-211ENST00000513346 MRPS18AQ9NVS2 196 aaKnown RBP10.22□□□□□ -0.77
TCOF1-211ENST00000513346 ACAD8Q9UKU7 415 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 TRBV11-1A0A0K0K1C0 115 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 PPP5D1E7EU14 171 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 TNFRSF10CO14798 259 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 ZNF93P35789 620 aaPredicted RBP10.22□□□□□ -0.77
TCOF1-211ENST00000513346 AGERQ15109 404 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 GUK1Q16774 197 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 Q6ZNB5 142 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms