RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 RASSF5Q8WWW0 418 aa11.64□□□□□ -0.55
SPCS3-204ENST00000513139 MCUR1Q96AQ8 359 aa11.64□□□□□ -0.55
SPCS3-204ENST00000513139 HSH2DQ96JZ2 352 aa11.64□□□□□ -0.55
SPCS3-204ENST00000513139 NSMCE2Q96MF7 247 aa11.64□□□□□ -0.55
SPCS3-204ENST00000513139 MCHR1Q99705 422 aa11.64□□□□□ -0.55
SPCS3-204ENST00000513139 MRPL13Q9BYD1 178 aaKnown RBP11.64□□□□□ -0.55
SPCS3-204ENST00000513139 MARCH7Q9H992 704 aa11.64□□□□□ -0.55
SPCS3-204ENST00000513139 ELOVL3Q9HB03 270 aa11.64□□□□□ -0.55
SPCS3-204ENST00000513139 CCNB1IP1Q9NPC3 277 aa11.64□□□□□ -0.55
SPCS3-204ENST00000513139 NANSQ9NR45 359 aa11.64□□□□□ -0.55
SPCS3-204ENST00000513139 ACTR3BQ9P1U1 418 aa11.64□□□□□ -0.55
SPCS3-204ENST00000513139 IL19Q9UHD0 177 aa11.64□□□□□ -0.55
SPCS3-204ENST00000513139 PPP1R3CQ9UQK1 317 aa11.64□□□□□ -0.55
SPCS3-204ENST00000513139 KMT2CQ8NEZ4 4911 aaKnown RBP11.64□□□□□ -0.55
SPCS3-204ENST00000513139 KIR2DS1A0A191URI9 304 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 CEACAM18A8MTB9 384 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 SURF4O15260 269 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 TSPAN15O95858 294 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 ZNF32P17041 273 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 TUBG1P23258 451 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 YAP1P46937 504 aaKnown RBP11.63□□□□□ -0.55
SPCS3-204ENST00000513139 PROK1P58294 105 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 ZNF74Q16587 644 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 C10orf128Q5T292 105 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 GPR157Q5UAW9 335 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 ZNF613Q6PF04 617 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 BRD3OSQ6XYD6 125 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 RFPL4BQ6ZWI9 263 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 FKBP9P1Q75LS8 142 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 HDDC2Q7Z4H3 204 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 RANBP3LQ86VV4 465 aaPredicted RBP11.63□□□□□ -0.55
SPCS3-204ENST00000513139 DHFR2Q86XF0 187 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 LINC01006Q8NI28 216 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 LZICQ8WZA0 190 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 DYRK2Q92630 601 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 PLEKHA8Q96JA3 519 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 ZNF347Q96SE7 839 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 TCF7L1Q9HCS4 588 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 TUBG2Q9NRH3 451 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 MAN2C1Q9NTJ4 1040 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 ASH2LQ9UBL3 628 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 MIOXQ9UGB7 285 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 RPS6KA6Q9UK32 745 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 NOTCH3Q9UM47 2321 aa11.63□□□□□ -0.55
SPCS3-204ENST00000513139 C5orf63A6NC05 138 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 CPSF4LA6NMK7 179 aaKnown RBP11.62□□□□□ -0.55
SPCS3-204ENST00000513139 TMEM178BH3BS89 294 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 CHP2O43745 196 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 TIMM8AO60220 97 aaPredicted RBP11.62□□□□□ -0.55
SPCS3-204ENST00000513139 FMO6PO60774 539 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 FSTL3O95633 263 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 THY1P04216 161 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 RPS2P15880 293 aaKnown RBP11.62□□□□□ -0.55
SPCS3-204ENST00000513139 FUT4P22083 530 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 ERFP50548 548 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 ARHGDIAP52565 204 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 GNB2P62879 340 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 PSG4Q00888 419 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 PSG7Q13046 419 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 HNRNPA0Q13151 305 aaKnown RBP11.62□□□□□ -0.55
SPCS3-204ENST00000513139 C2orf68Q2NKX9 166 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 BEAN1Q3B7T3 259 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 IFI44LQ53G44 452 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 ENTPD8Q5MY95 495 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 KPRPQ5T749 579 aaPredicted RBP11.62□□□□□ -0.55
SPCS3-204ENST00000513139 REC114Q7Z4M0 266 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 TSEN54Q7Z6J9 526 aaKnown RBP11.62□□□□□ -0.55
SPCS3-204ENST00000513139 ALDH16A1Q8IZ83 802 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 NOXO1Q8NFA2 376 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 SSMEM1Q8WWF3 244 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 UTP4Q969X6 686 aaKnown RBP11.62□□□□□ -0.55
SPCS3-204ENST00000513139 ASB9Q96DX5 294 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 PYURFQ96I23 114 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 SMURF2Q9HAU4 748 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 TNFRSF19Q9NS68 423 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 ZNF229Q9UJW7 825 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 POMPQ9Y244 141 aa11.62□□□□□ -0.55
SPCS3-204ENST00000513139 TCRBV5S2A0A599 114 aa11.61□□□□□ -0.55
SPCS3-204ENST00000513139 J3KTA2 159 aa11.61□□□□□ -0.55
SPCS3-204ENST00000513139 PIN1P1O15428 100 aa11.61□□□□□ -0.55
SPCS3-204ENST00000513139 CH25HO95992 272 aa11.61□□□□□ -0.55
SPCS3-204ENST00000513139 HIST1H2ABP04908 130 aa11.61□□□□□ -0.55
SPCS3-204ENST00000513139 MELTFP08582 738 aa11.61□□□□□ -0.55
SPCS3-204ENST00000513139 ASAH2BP0C7U1 165 aa11.61□□□□□ -0.55
SPCS3-204ENST00000513139 TRAP1Q12931 704 aaKnown RBP11.61□□□□□ -0.55
SPCS3-204ENST00000513139 PIN1Q13526 163 aaPredicted RBP11.61□□□□□ -0.55
SPCS3-204ENST00000513139 FAM27BQ5VT28 67 aa11.61□□□□□ -0.55
SPCS3-204ENST00000513139 LCN8Q6JVE9 175 aa11.61□□□□□ -0.55
SPCS3-204ENST00000513139 ARL9Q6T311 187 aa11.61□□□□□ -0.55
SPCS3-204ENST00000513139 Q6ZPA2 131 aa11.61□□□□□ -0.55
SPCS3-204ENST00000513139 HIST3H2AQ7L7L0 130 aa11.61□□□□□ -0.55
SPCS3-204ENST00000513139 KLBQ86Z14 1044 aa11.61□□□□□ -0.55
SPCS3-204ENST00000513139 OR2Z1Q8NG97 314 aa11.61□□□□□ -0.55
SPCS3-204ENST00000513139 AKR7LQ8NHP1 331 aa11.61□□□□□ -0.55
SPCS3-204ENST00000513139 HIST1H2ACQ93077 130 aa11.61□□□□□ -0.55
SPCS3-204ENST00000513139 NABP1Q96AH0 204 aa11.61□□□□□ -0.55
SPCS3-204ENST00000513139 C4orf45Q96LM5 186 aa11.61□□□□□ -0.55
SPCS3-204ENST00000513139 MUC13Q9H3R2 512 aa11.61□□□□□ -0.55
SPCS3-204ENST00000513139 STX18Q9P2W9 335 aaKnown RBP11.61□□□□□ -0.55
SPCS3-204ENST00000513139 SAMD4AQ9UPU9 718 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms