RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 HSPA5P11021 654 aaKnown RBP0.52□□□□□ -2.33
PDGFC-208ENST00000512711 IFI30P13284 250 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 ETS2P15036 469 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 POLR2IP36954 125 aaKnown RBP0.52□□□□□ -2.33
PDGFC-208ENST00000512711 MPV17P39210 176 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 EIF1P41567 113 aaKnown RBP0.52□□□□□ -2.33
PDGFC-208ENST00000512711 GALR1P47211 349 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 ARFIP1P53367 373 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 VSX2P58304 361 aaPredicted RBP0.52□□□□□ -2.33
PDGFC-208ENST00000512711 TGM3Q08188 693 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 ELP6Q0PNE2 266 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 SOHLH1Q5JUK2 328 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 ANKRD26P1Q6NSI1 321 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 LRRC74BQ6ZQY2 392 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 NKAIN4Q8IVV8 208 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 LIX1Q8N485 282 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 EID2Q8N6I1 236 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 NPWQ8N729 165 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 FAM83FQ8NEG4 500 aaPredicted RBP0.52□□□□□ -2.33
PDGFC-208ENST00000512711 OR11H7Q8NGC8 314 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 OR1L4Q8NGR5 311 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 RHEBL1Q8TAI7 183 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 MUC7Q8TAX7 377 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 CXorf40AQ8TE69 158 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 LRRC29Q8WV35 223 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 PKNOX2Q96KN3 472 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 RPRD1AQ96P16 312 aaPredicted RBP0.52□□□□□ -2.33
PDGFC-208ENST00000512711 TMEM43Q9BTV4 400 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 RMND5AQ9H871 391 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 LIN28AQ9H9Z2 209 aaKnown RBP0.52□□□□□ -2.33
PDGFC-208ENST00000512711 NLE1Q9NVX2 485 aaPredicted RBP0.52□□□□□ -2.33
PDGFC-208ENST00000512711 TAS2R1Q9NYW7 299 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 TRMT112Q9UI30 125 aaKnown RBP0.52□□□□□ -2.33
PDGFC-208ENST00000512711 MUC5BQ9HC84 5762 aaPredicted RBP0.51□□□□□ -2.33
PDGFC-208ENST00000512711 A0A1W2PPE3 182 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 GOLGA8SH3BPF8 625 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 H7C417 338 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 HAS3O00219 553 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 NUPL2O15504 423 aaKnown RBP0.51□□□□□ -2.33
PDGFC-208ENST00000512711 PSTPIP1O43586 416 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 SOX15O60248 233 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 PLIN3O60664 434 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 SEMA3DO95025 777 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 FSTL3O95633 263 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 IGLV7-43P04211 117 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 ATP1B2P14415 290 aaPredicted RBP0.51□□□□□ -2.33
PDGFC-208ENST00000512711 KITLGP21583 273 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 F2RP25116 425 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 CHMLP26374 656 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 YWHAGP61981 247 aaKnown RBP eCLIP0.51□□□□□ -2.33
PDGFC-208ENST00000512711 CYP24A1Q07973 514 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 MYO9BQ13459 2157 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 LUZP6Q538Z0 58 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 SPNS3Q6ZMD2 512 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 MS4A15Q8N5U1 240 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 LY6G5BQ8NDX9 201 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 OR4M1Q8NGD0 313 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 UBE2Q2Q8WVN8 375 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 RLN3Q8WXF3 142 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 CSPG4P5Q96PW8 444 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 RSPH9Q9H1X1 276 aaPredicted RBP0.51□□□□□ -2.33
PDGFC-208ENST00000512711 CSNK1G1Q9HCP0 422 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 SDAD1Q9NVU7 687 aaKnown RBP eCLIP0.51□□□□□ -2.33
PDGFC-208ENST00000512711 RHBDL2Q9NX52 303 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 MTFP1Q9UDX5 166 aa0.51□□□□□ -2.33
PDGFC-208ENST00000512711 CHTOPQ9Y3Y2 248 aaKnown RBP0.51□□□□□ -2.33
PDGFC-208ENST00000512711 ZBED9Q6R2W3 1325 aa0.5□□□□□ -2.33
PDGFC-208ENST00000512711 SMIM26A0A096LP01 95 aa0.5□□□□□ -2.33
PDGFC-208ENST00000512711 A0A0J9YXV3 536 aa0.5□□□□□ -2.33
PDGFC-208ENST00000512711 PRAMEF26H0Y7S4 382 aa0.5□□□□□ -2.33
PDGFC-208ENST00000512711 NVLO15381 856 aaKnown RBP0.5□□□□□ -2.33
PDGFC-208ENST00000512711 PAHP00439 452 aa0.5□□□□□ -2.33
PDGFC-208ENST00000512711 GGT1P19440 569 aa0.5□□□□□ -2.33
PDGFC-208ENST00000512711 PSMA5P28066 241 aa0.5□□□□□ -2.33
PDGFC-208ENST00000512711 CD86P42081 329 aa0.5□□□□□ -2.33
PDGFC-208ENST00000512711 SYNJ2BPP57105 145 aa0.5□□□□□ -2.33
PDGFC-208ENST00000512711 SIGLEC14Q08ET2 396 aa0.5□□□□□ -2.33
PDGFC-208ENST00000512711 NCF4Q15080 339 aa0.5□□□□□ -2.33
PDGFC-208ENST00000512711 Q6ZPB1 254 aaPredicted RBP0.5□□□□□ -2.33
PDGFC-208ENST00000512711 FAM9BQ8IZU0 186 aa0.5□□□□□ -2.33
PDGFC-208ENST00000512711 PDIK1LQ8N165 341 aa0.5□□□□□ -2.33
PDGFC-208ENST00000512711 TRPV1Q8NER1 839 aa0.5□□□□□ -2.33
PDGFC-208ENST00000512711 CMTM2Q8TAZ6 248 aa0.5□□□□□ -2.33
PDGFC-208ENST00000512711 PLPPR1Q8TBJ4 325 aa0.5□□□□□ -2.33
PDGFC-208ENST00000512711 ZNF502Q8TBZ5 544 aa0.5□□□□□ -2.33
PDGFC-208ENST00000512711 STMN2Q93045 179 aa0.5□□□□□ -2.33
PDGFC-208ENST00000512711 CHCHD7Q9BUK0 85 aa0.5□□□□□ -2.33
PDGFC-208ENST00000512711 RIBC2Q9H4K1 309 aa0.5□□□□□ -2.33
PDGFC-208ENST00000512711 ASF1BQ9NVP2 202 aa0.5□□□□□ -2.33
PDGFC-208ENST00000512711 SLC7A8Q9UHI5 535 aa0.5□□□□□ -2.33
PDGFC-208ENST00000512711 YARS2Q9Y2Z4 477 aaKnown RBP0.5□□□□□ -2.33
PDGFC-208ENST00000512711 GOLT1BQ9Y3E0 138 aa0.5□□□□□ -2.33
PDGFC-208ENST00000512711 KCNE3Q9Y6H6 103 aa0.5□□□□□ -2.33
PDGFC-208ENST00000512711 SNTNA6NMZ2 147 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 AQP9O43315 295 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 SERPINB7O75635 380 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 CLPXO76031 633 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 LCA5LO95447 670 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 TMEM50AO95807 157 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 RPN2P04844 631 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms