RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 CNR1P21554 472 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 ABCD3P28288 659 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 NKX2-1P43699 371 aaPredicted RBP5.27□□□□□ -1.57
USP38-203ENST00000511739 GIPRP48546 466 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 OR1C1Q15619 314 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 CGB2Q6NT52 195 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 BTNL8Q6UX41 500 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 ZNF705AQ6ZN79 300 aaPredicted RBP5.27□□□□□ -1.57
USP38-203ENST00000511739 NPEPL1Q8NDH3 523 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 LILRB1Q8NHL6 650 aaPredicted RBP5.27□□□□□ -1.57
USP38-203ENST00000511739 OLIG1Q8TAK6 271 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 ZNF799Q96GE5 643 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 JAM3Q9BX67 310 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 SEMA4GQ9NTN9 838 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 VAPAQ9P0L0 249 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 ZNF391Q9UJN7 358 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 ATAD5Q96QE3 1844 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 H0Y8X5 98 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 H7BYZ3 331 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 NCR1O76036 304 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 PTTG1O95997 202 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 NRASP01111 189 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 CD3EP07766 207 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 OR4A8P0C604 315 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 ATXN1LP0C7T5 689 aaKnown RBP5.27□□□□□ -1.57
USP38-203ENST00000511739 CEACAM3P40198 252 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 FOXA1P55317 472 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 MICBQ29980 383 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 SPRED1Q7Z699 444 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 ADGRE4PQ86SQ3 457 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 DNAJC5GQ8N7S2 189 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 FADS6Q8N9I5 356 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 ZNF511Q8NB15 262 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 OR2Z1Q8NG97 314 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 OR6M1Q8NGM8 313 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 SLC7A6Q92536 515 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 TAAR6Q96RI8 345 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 LRFN3Q9BTN0 628 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 MS4A8Q9BY19 250 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 BANF2Q9H503 90 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 GALNT9Q9HCQ5 603 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 LYRM4Q9HD34 91 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 LIN7CQ9NUP9 197 aaKnown RBP5.27□□□□□ -1.57
USP38-203ENST00000511739 DCAF16Q9NXF7 216 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 GAR1Q9NY12 217 aaKnown RBP5.27□□□□□ -1.57
USP38-203ENST00000511739 CNOT2Q9NZN8 540 aaKnown RBP5.27□□□□□ -1.57
USP38-203ENST00000511739 NAGKQ9UJ70 344 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 SLC17A4Q9Y2C5 497 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 IGLV3-10A0A075B6K4 115 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 TARM1B6A8C7 271 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 OR2J2O76002 312 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 AREGP15514 252 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 FPR3P25089 353 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 BRS3P32247 399 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 CCL7P80098 99 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 PRR27Q6MZM9 219 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 DRAM2Q6UX65 266 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 OR6K3Q8NGY3 331 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 OR2T11Q8NH01 316 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 ACY3Q96HD9 319 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 POM121L2Q96KW2 1035 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 SLC29A1Q99808 456 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 FGF22Q9HCT0 170 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 THYN1Q9P016 225 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 CACFD1Q9UGQ2 172 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 KCNMB2Q9Y691 235 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 CEPT1Q9Y6K0 416 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 SMCHD1A6NHR9 2005 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 C2CD4DB7Z1M9 353 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 MS4A18H0YCH9 400 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 GFYI3L273 518 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 J3KTA2 159 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 F2RL2O00254 374 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 DNPH1O43598 174 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 PRKRAO75569 313 aaKnown RBP5.26□□□□□ -1.57
USP38-203ENST00000511739 CHRM2P08172 466 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 TRAPPC2P0DI81 140 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 TRAPPC2BP0DI82 140 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 SNRPBP14678 240 aaKnown RBP5.26□□□□□ -1.57
USP38-203ENST00000511739 HTN1P15515 57 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 ELK1P19419 428 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 COX7A1P24310 79 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 EPHA2P29317 976 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 HOXC8P31273 242 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 LIM2P55344 173 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 MS4A18Q3C1V0 323 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 SLC48A1Q6P1K1 146 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 CCDC71Q8IV32 467 aaPredicted RBP5.26□□□□□ -1.57
USP38-203ENST00000511739 SMAP2Q8WU79 429 aaPredicted RBP5.26□□□□□ -1.57
USP38-203ENST00000511739 SFT2D1Q8WV19 159 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 RASD2Q96D21 266 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 PDLIM5Q96HC4 596 aaKnown RBP5.26□□□□□ -1.57
USP38-203ENST00000511739 EGLN2Q96KS0 407 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 SORT1Q99523 831 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 TCEAL7Q9BRU2 100 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 CTSFQ9UBX1 484 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 EMCNQ9ULC0 261 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 AMMECR1Q9Y4X0 333 aaPredicted RBP5.26□□□□□ -1.57
USP38-203ENST00000511739 IGHV3-15A0A0B4J1V0 119 aa5.26□□□□□ -1.57
USP38-203ENST00000511739 ZNF320A2RRD8 509 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms