RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 A0A1W2PRM7 423 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 CENPXA8MT69 81 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 H3BN98 237 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 PLPP1O14494 284 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 RNF113AO15541 343 aaKnown RBP3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 ETHE1O95571 254 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 HOXC4P09017 264 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 CCDC172P0C7W6 258 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 IVDP26440 423 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 CASQ1P31415 396 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 CDKN2BP42772 138 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 ZNF136P52737 540 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 HADHBP55084 474 aaKnown RBP3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 YWHAEP62258 255 aaKnown RBP3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 SLC39A6Q13433 755 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 MPPED2Q15777 294 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 FAM83EQ2M2I3 478 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 RWDD4Q6NW29 188 aaKnown RBP3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 ZNF429Q86V71 674 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 SPERTQ8NA61 448 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 C11orf72Q8NBR9 251 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 OR4A15Q8NGL6 344 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 OR5AR1Q8NGP9 310 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 SIKE1Q9BRV8 207 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 CHAC1Q9BUX1 264 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 TM6SF2Q9BZW4 377 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 CDC42EP4Q9H3Q1 356 aaKnown RBP3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 KIR3DX1Q9H7L2 352 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 PDFQ9HBH1 243 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 DEC1Q9P2X7 70 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 CROCCQ5TZA2 2017 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 TMEM94Q12767 1356 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 IGLV11-55A0A075B6I3 123 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 LOC100653049A0A140TA62 436 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 FAM166BA8MTA8 275 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 TRIM49D1C9J1S8 452 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 M0QX08 132 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 GMDSO60547 372 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 KRT34O76011 436 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 LCA5LO95447 670 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 HOXB8P17481 243 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 RAB5AP20339 215 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 PFN2P35080 140 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 SERPINB8P50452 374 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 KIR2DS1Q14954 304 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 PON2Q15165 354 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 TSC22D1Q15714 1073 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 ZNF829Q3KNS6 432 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 PTPN20Q4JDL3 420 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 PRMT9Q6P2P2 845 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 FAM71AQ8IYT1 594 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 OR10AD1Q8NGE0 317 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 OR10W1Q8NGF6 305 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 IL22RA2Q969J5 263 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 FAM104AQ969W3 186 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 EXOSC8Q96B26 276 aaKnown RBP3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 MSANTD3Q96H12 275 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 BTN2A3PQ96KV6 586 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 SLC25A2Q9BXI2 301 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 SAV1Q9H4B6 383 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 IFNKQ9P0W0 207 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 KPTNQ9Y664 436 aa3.63□□□□□ -1.83
HMGB1P47-201ENST00000511281 IGHV3OR16-9A0A0B4J2B5 98 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 IGHV3-66A0A0C4DH42 116 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 ERI2A8K979 691 aaKnown RBP3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 ZNF879B4DU55 563 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 ANKRD65E5RJM6 399 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 CD5LO43866 347 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 MPDU1O75352 247 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 PGA4P0DJD7 388 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 PGA3P0DJD8 388 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 PGA5P0DJD9 388 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 ERGP11308 486 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 ADRB3P13945 408 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 CEACAM3P40198 252 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 CEACAM6P40199 344 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 CYB561P49447 251 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 VSX2P58304 361 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 PPP1CBP62140 327 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 PSMC5P62195 406 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 RGNQ15493 299 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 STK11Q15831 433 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 VAMP3Q15836 100 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 ARL9Q6T311 187 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 ABHD12BQ7Z5M8 362 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 MRPL55Q7Z7F7 128 aaKnown RBP3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 UNC93AQ86WB7 457 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 SPAG16Q8N0X2 631 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 KIF2BQ8N4N8 673 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 CBR4Q8N4T8 237 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 ASCC1Q8N9N2 400 aaKnown RBP3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 MDS2Q8NDY4 140 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 OR51E1Q8TCB6 317 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 NTAN1Q96AB6 310 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 RNF145Q96MT1 663 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 ZNF681Q96N22 645 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 TAAR1Q96RJ0 339 aa3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 RPP21Q9H633 154 aaKnown RBP3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 UBE2ZQ9H832 354 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P47-201ENST00000511281 SLC39A1Q9NY26 324 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms