RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 PTCHD4Q6ZW05 846 aa12.97□□□□□ -0.33
TPM3-219ENST00000509409 JAZF1Q86VZ6 243 aa12.97□□□□□ -0.33
TPM3-219ENST00000509409 GJC3Q8NFK1 279 aa12.97□□□□□ -0.33
TPM3-219ENST00000509409 ZNF582Q96NG8 517 aaPredicted RBP12.97□□□□□ -0.33
TPM3-219ENST00000509409 TSSK2Q96PF2 358 aa12.97□□□□□ -0.33
TPM3-219ENST00000509409 ERMAPQ96PL5 475 aaPredicted RBP12.97□□□□□ -0.33
TPM3-219ENST00000509409 GPX7Q96SL4 187 aaPredicted RBP12.97□□□□□ -0.33
TPM3-219ENST00000509409 PLA2G12AQ9BZM1 189 aa12.97□□□□□ -0.33
TPM3-219ENST00000509409 NTN4Q9HB63 628 aa12.97□□□□□ -0.33
TPM3-219ENST00000509409 MMP26Q9NRE1 261 aa12.97□□□□□ -0.33
TPM3-219ENST00000509409 DDX28Q9NUL7 540 aaKnown RBP12.97□□□□□ -0.33
TPM3-219ENST00000509409 DCAF13Q9NV06 445 aaKnown RBP12.97□□□□□ -0.33
TPM3-219ENST00000509409 AUP1Q9Y679 476 aa12.97□□□□□ -0.33
TPM3-219ENST00000509409 V9GYQ6 96 aa12.97□□□□□ -0.33
TPM3-219ENST00000509409 PPIAL4EA0A075B759 164 aa12.96□□□□□ -0.33
TPM3-219ENST00000509409 PPIAL4CA0A0B4J2A2 164 aa12.96□□□□□ -0.33
TPM3-219ENST00000509409 PPIAL4DF5H284 164 aa12.96□□□□□ -0.33
TPM3-219ENST00000509409 PPP1R3DO95685 299 aa12.96□□□□□ -0.33
TPM3-219ENST00000509409 RENP00797 406 aa12.96□□□□□ -0.33
TPM3-219ENST00000509409 PPIAL4FP0DN26 164 aa12.96□□□□□ -0.33
TPM3-219ENST00000509409 SMIM11AP58511 58 aa12.96□□□□□ -0.33
TPM3-219ENST00000509409 ZMYND11Q15326 602 aa12.96□□□□□ -0.33
TPM3-219ENST00000509409 MEP1BQ16820 701 aa12.96□□□□□ -0.33
TPM3-219ENST00000509409 ESCO2Q56NI9 601 aa12.96□□□□□ -0.33
TPM3-219ENST00000509409 ARMCX4Q5H9R4 360 aa12.96□□□□□ -0.33
TPM3-219ENST00000509409 LEG1Q6P5S2 330 aa12.96□□□□□ -0.33
TPM3-219ENST00000509409 RNF148Q8N7C7 305 aa12.96□□□□□ -0.33
TPM3-219ENST00000509409 OR13G1Q8NGZ3 307 aa12.96□□□□□ -0.33
TPM3-219ENST00000509409 POP5Q969H6 163 aaKnown RBP12.96□□□□□ -0.33
TPM3-219ENST00000509409 APOBEC3DQ96AK3 386 aaPredicted RBP12.96□□□□□ -0.33
TPM3-219ENST00000509409 C7orf34Q96L11 122 aa12.96□□□□□ -0.33
TPM3-219ENST00000509409 MRI1Q9BV20 369 aa12.96□□□□□ -0.33
TPM3-219ENST00000509409 CDADC1Q9BWV3 514 aa12.96□□□□□ -0.33
TPM3-219ENST00000509409 SPAG4Q9NPE6 437 aa12.96□□□□□ -0.33
TPM3-219ENST00000509409 ABCD2Q9UBJ2 740 aa12.96□□□□□ -0.33
TPM3-219ENST00000509409 PPIAL4AQ9Y536 164 aa12.96□□□□□ -0.33
TPM3-219ENST00000509409 TRAPPC2LH3BP13 241 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 TMEM178BH3BS89 294 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 IFNL4K9M1U5 179 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 GADD45GO95257 159 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 TXNDC12O95881 172 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 MDH2P40926 338 aaKnown RBP12.95□□□□□ -0.34
TPM3-219ENST00000509409 SLC6A9P48067 706 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 SRP9P49458 86 aaKnown RBP12.95□□□□□ -0.34
TPM3-219ENST00000509409 COMPP49747 757 aaPredicted RBP12.95□□□□□ -0.34
TPM3-219ENST00000509409 SPIBQ01892 262 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 ZNF154Q13106 437 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 KCNMB1Q16558 191 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 RFX4Q33E94 735 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 PGM2L1Q6PCE3 622 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 CORO6Q6QEF8 472 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 MUC20Q8N307 709 aaPredicted RBP12.95□□□□□ -0.34
TPM3-219ENST00000509409 ZDHHC22Q8N966 263 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 OR8G5Q8NG78 346 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 OR10AD1Q8NGE0 317 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 ZNF420Q8TAQ5 688 aaPredicted RBP12.95□□□□□ -0.34
TPM3-219ENST00000509409 FANK1Q8TC84 345 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 MCUR1Q96AQ8 359 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 PYURFQ96I23 114 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 GPA33Q99795 319 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 COQ7Q99807 217 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 GCM1Q9NP62 436 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 MED4Q9NPJ6 270 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 ATPIF1Q9UII2 106 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 NUP50Q9UKX7 468 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 B9D1Q9UPM9 204 aa12.95□□□□□ -0.34
TPM3-219ENST00000509409 WNK2Q9Y3S1 2297 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 IGHV3-64DA0A0J9YX35 117 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 J3QW42 95 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 OR10H3O60404 316 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 ZNF205O95201 554 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 HLA-DQA2P01906 255 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 NOS3P29474 1203 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 PRDX6P30041 224 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 SLC6A6P31641 620 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 FXYD6P3P58550 94 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 SEC61A1P61619 476 aaKnown RBP12.94□□□□□ -0.34
TPM3-219ENST00000509409 SLC36A3Q495N2 470 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 FBXW12Q6X9E4 464 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 FAM86B1Q8N7N1 296 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 SIGLECL1Q8N7X8 197 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 DEFB108BQ8NET1 73 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 OR2AJ1Q8NGZ0 328 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 OR4K13Q8NH42 304 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 DVL3Q92997 716 aaPredicted RBP12.94□□□□□ -0.34
TPM3-219ENST00000509409 MEGF10Q96KG7 1140 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 SIGLEC11Q96RL6 698 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 NMNAT3Q96T66 252 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 PITX2Q99697 317 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 IFT27Q9BW83 186 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 HCAR1Q9BXC0 346 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 FAM107BQ9H098 131 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 HDHD2Q9H0R4 259 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 WDR76Q9H967 626 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 ESM1Q9NQ30 184 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 TMEM100Q9NV29 134 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 OR5V1Q9UGF6 321 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 TMCC3Q9ULS5 477 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 INSIG2Q9Y5U4 225 aa12.94□□□□□ -0.34
TPM3-219ENST00000509409 LHFPL6Q9Y693 200 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms