RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 MID1IP1Q9NPA3 183 aa3.12□□□□□ -1.91
RNF4-211ENST00000509206 POLE3Q9NRF9 147 aa3.12□□□□□ -1.91
RNF4-211ENST00000509206 TBCCD1Q9NVR7 557 aa3.12□□□□□ -1.91
RNF4-211ENST00000509206 TMEM38BQ9NVV0 291 aa3.12□□□□□ -1.91
RNF4-211ENST00000509206 C1orf109Q9NX04 203 aa3.12□□□□□ -1.91
RNF4-211ENST00000509206 GLTPQ9NZD2 209 aa3.12□□□□□ -1.91
RNF4-211ENST00000509206 SELENONQ9NZV5 590 aa3.12□□□□□ -1.91
RNF4-211ENST00000509206 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.12□□□□□ -1.91
RNF4-211ENST00000509206 BAIAP2L1Q9UHR4 511 aa3.12□□□□□ -1.91
RNF4-211ENST00000509206 ZNF225Q9UK10 706 aa3.12□□□□□ -1.91
RNF4-211ENST00000509206 TMCC3Q9ULS5 477 aa3.12□□□□□ -1.91
RNF4-211ENST00000509206 JRKLQ9Y4A0 524 aa3.12□□□□□ -1.91
RNF4-211ENST00000509206 HUWE1Q7Z6Z7 4374 aaKnown RBP3.12□□□□□ -1.91
RNF4-211ENST00000509206 CSMD3Q7Z407 3707 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 TRAV38-1A0A0B4J264 116 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 LOC102725191A0A1B0GVB3 256 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 C9orf118A6NHY6 69 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 DBX1A6NMT0 343 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 A8MT66 165 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 TMEM114B3SHH9 223 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 FAAHO00519 579 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 DVL1O14640 695 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 TBX19O60806 448 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 GLCEO94923 617 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 ABHD16AO95870 558 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 LHBP01229 141 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 IGF2P01344 180 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 CD1AP06126 327 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 DBIP07108 87 aaKnown RBP3.11□□□□□ -1.91
RNF4-211ENST00000509206 INHBAP08476 426 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 GKN3PP0CG01 181 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 MED14OSP0DP75 135 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 LAMP1P11279 417 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 HLA-DOBP13765 273 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 TUBG1P23258 451 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 POU1F1P28069 291 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 ARRB2P32121 409 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 MYCNOSP40205 109 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 FRKP42685 505 aaPredicted RBP3.11□□□□□ -1.91
RNF4-211ENST00000509206 GSK3BP49841 420 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 ZNF75DP51815 510 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 UBE2E1P51965 193 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 BIDP55957 195 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 CLRN1P58418 232 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 RPL38P63173 70 aaKnown RBP3.11□□□□□ -1.91
RNF4-211ENST00000509206 IL5RAQ01344 420 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 ACSM1Q08AH1 577 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 NAB1Q13506 487 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 SGCAQ16586 387 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 GAGE13Q4V321 117 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 C4orf46Q504U0 113 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 UNC50Q53HI1 259 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 CEP85LQ5SZL2 805 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 C9orf66Q5T8R8 295 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 INTS11Q5TA45 600 aaKnown RBP3.11□□□□□ -1.91
RNF4-211ENST00000509206 LCE3BQ5TA77 95 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 NCR3LG1Q68D85 454 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 SFRP4Q6FHJ7 346 aaPredicted RBP3.11□□□□□ -1.91
RNF4-211ENST00000509206 ZNF841Q6ZN19 808 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 COLCA1Q6ZS62 124 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 ZCCHC23Q6ZST2 131 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 CYS1Q717R9 158 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 ZNF572Q7Z3I7 529 aaPredicted RBP3.11□□□□□ -1.91
RNF4-211ENST00000509206 PEX5LQ8IYB4 626 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 PNKDQ8N490 385 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 OR2C3Q8N628 320 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 CCNYL1Q8N7R7 359 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 NPEPL1Q8NDH3 523 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 OR7A2PQ8NGA2 310 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 OR14K1Q8NGZ2 314 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 AKR7LQ8NHP1 331 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 C10orf82Q8WW14 230 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 PTP4A1Q93096 173 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 ZNF566Q969W8 418 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 TUBGCP3Q96CW5 907 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 ZNF764Q96H86 408 aaPredicted RBP3.11□□□□□ -1.91
RNF4-211ENST00000509206 METTL2AQ96IZ6 378 aaKnown RBP3.11□□□□□ -1.91
RNF4-211ENST00000509206 COG8Q96MW5 612 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 ZNF582Q96NG8 517 aaPredicted RBP3.11□□□□□ -1.91
RNF4-211ENST00000509206 CCT7Q99832 543 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 CDCA4Q9BXL8 241 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 MTHFD2LQ9H903 347 aaPredicted RBP3.11□□□□□ -1.91
RNF4-211ENST00000509206 ZNF702PQ9H963 129 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 LZTFL1Q9NQ48 299 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 TRIM36Q9NQ86 728 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 TUBG2Q9NRH3 451 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 PITPNC1Q9UKF7 332 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 PRDM4Q9UKN5 801 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 ZNF256Q9Y2P7 627 aaPredicted RBP3.11□□□□□ -1.91
RNF4-211ENST00000509206 CAPN7Q9Y6W3 813 aa3.11□□□□□ -1.91
RNF4-211ENST00000509206 DNAH7Q8WXX0 4024 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 STARD9Q9P2P6 4700 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 NUP214P35658 2090 aaPredicted RBP3.1□□□□□ -1.91
RNF4-211ENST00000509206 TRAV36DV7A0A075B6V5 113 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 A0A087WUJ7 227 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 RNF103-CHMP3A0A140T963 221 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 EXOC1LA0A1B0GW35 172 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 A0A1W2PQ09 198 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 E7ESA3 106 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 C11orf98E9PRG8 122 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms