RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 HDDC2Q7Z4H3 204 aa7.21□□□□□ -1.26
COL4A3BP-206ENST00000508809 CROCCP2Q86T23 111 aa7.21□□□□□ -1.26
COL4A3BP-206ENST00000508809 ANKRD42Q8N9B4 389 aa7.21□□□□□ -1.26
COL4A3BP-206ENST00000508809 C11orf65Q8NCR3 313 aa7.21□□□□□ -1.26
COL4A3BP-206ENST00000508809 NOXO1Q8NFA2 376 aa7.21□□□□□ -1.26
COL4A3BP-206ENST00000508809 LIPHQ8WWY8 451 aa7.21□□□□□ -1.26
COL4A3BP-206ENST00000508809 TMIGD2Q96BF3 282 aa7.21□□□□□ -1.26
COL4A3BP-206ENST00000508809 SIGLEC11Q96RL6 698 aa7.21□□□□□ -1.26
COL4A3BP-206ENST00000508809 CCNB1IP1Q9NPC3 277 aa7.21□□□□□ -1.26
COL4A3BP-206ENST00000508809 TMEM106BQ9NUM4 274 aa7.21□□□□□ -1.26
COL4A3BP-206ENST00000508809 ARMCX1Q9P291 453 aa7.21□□□□□ -1.26
COL4A3BP-206ENST00000508809 STX18Q9P2W9 335 aaKnown RBP7.21□□□□□ -1.26
COL4A3BP-206ENST00000508809 IL20RAQ9UHF4 553 aa7.21□□□□□ -1.26
COL4A3BP-206ENST00000508809 SLC7A7Q9UM01 511 aa7.21□□□□□ -1.26
COL4A3BP-206ENST00000508809 ANGPT4Q9Y264 503 aa7.21□□□□□ -1.26
COL4A3BP-206ENST00000508809 A0A1B0GUS0 222 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 KPNA4O00629 521 aaPredicted RBP7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 SLC2A10O95528 541 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 MT-ND1P03886 318 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 CST2P09228 141 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 WNT2P09544 360 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 IGHV4-38-2P0DP08 117 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 FUT1P19526 365 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 MDKP21741 143 aaPredicted RBP7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 TUBG1P23258 451 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 AQP2P41181 271 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 DAP3P51398 398 aaKnown RBP7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 SEC61A1P61619 476 aaKnown RBP7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 BTG1P62324 171 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 TNFAIP6P98066 277 aaPredicted RBP7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 HNRNPA0Q13151 305 aaKnown RBP7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 RFPL4BQ6ZWI9 263 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 ZNF771Q7L3S4 317 aaPredicted RBP7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 NANOGNBQ7Z5D8 188 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 ZER1Q7Z7L7 766 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 OR52E2Q8NGJ4 325 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 AKR7LQ8NHP1 331 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 HDAC2Q92769 488 aaKnown RBP7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 TAF15Q92804 592 aaKnown RBP eCLIP7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 UPRTQ96BW1 309 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 SLC7A6OSQ96CW6 309 aaPredicted RBP7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 C4orf45Q96LM5 186 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 DCLRE1CQ96SD1 692 aaKnown RBP7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 CPPED1Q9BRF8 314 aaPredicted RBP7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 MRI1Q9BV20 369 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 OR2H1Q9GZK4 316 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 MS4A7Q9GZW8 240 aaPredicted RBP7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 WNT5BQ9H1J7 359 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 CENPHQ9H3R5 247 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 ELOVL3Q9HB03 270 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 TUBG2Q9NRH3 451 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 TBCCD1Q9NVR7 557 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 CCDC167Q9P0B6 97 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 IL19Q9UHD0 177 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 TIMM10BQ9Y5J6 103 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 USH1CQ9Y6N9 552 aa7.2□□□□□ -1.26
COL4A3BP-206ENST00000508809 MCIDASD6RGH6 385 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 OR7A10O76100 309 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 FSTL3O95633 263 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 COX5BP10606 129 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 UMPSP11172 480 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 TNFRSF1AP19438 455 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 KITLGP21583 273 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 LAP3P28838 519 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 RBMXP38159 391 aaKnown RBP7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 MDH2P40926 338 aaKnown RBP7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 RBM34P42696 430 aaKnown RBP7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 ARHGDIAP52565 204 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 STX1BP61266 288 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 PCBD1P61457 104 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 ERVK-25P63136 954 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 ZMYND11Q15326 602 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 TAF11Q15544 211 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 SGCAQ16586 387 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 ZNF362Q5T0B9 420 aaPredicted RBP7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 ZNF774Q6NX45 483 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 LRRN1Q6UXK5 716 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 Q6ZR03 302 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 FOXL2NBQ6ZUU3 175 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 PARP8Q8N3A8 854 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 DPP10Q8N608 796 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 WACQ9BTA9 647 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 CCDC28BQ9BUN5 200 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 PARD6BQ9BYG5 372 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 TXNIPQ9H3M7 391 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 NANOGQ9H9S0 305 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 TMEM165Q9HC07 324 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 INIPQ9NRY2 104 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 MAN2C1Q9NTJ4 1040 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 PDP1Q9P0J1 537 aaPredicted RBP7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 LRCH1Q9Y2L9 728 aa7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 SOX21Q9Y651 276 aaPredicted RBP7.19□□□□□ -1.26
COL4A3BP-206ENST00000508809 KIR2DS1A0A191URI9 304 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 GMNCA6NCL1 334 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 CEACAM18A8MTB9 384 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 TMEM178BH3BS89 294 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 IFNL4K9M1U5 179 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 SURF4O15260 269 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 POLR3GO15318 223 aaPredicted RBP7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 TIMM8AO60220 97 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms