RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 ZNF705EA8MWA4 302 aaPredicted RBP4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 PPP5D1E7EU14 171 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 F5H0A9 414 aaPredicted RBP4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 RNASEK-C17orf49H0YIS7 233 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 TP53I11O14683 189 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 ARPC1BO15143 372 aaKnown RBP4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 MAGEB4O15481 346 aaPredicted RBP4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 FLRT2O43155 660 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 NDUFS3O75489 264 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 CBR3O75828 277 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 AKR7A3O95154 331 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 CLDN9O95484 217 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 C22orf31O95567 290 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 SLC25A27O95847 323 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 HLA-DQB2P05538 268 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 SFTA3P0C7M3 94 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 ETFAP13804 333 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 NPPBP16860 134 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 ZNF25P17030 456 aaPredicted RBP4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 HLA-GP17693 338 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 BCKDHBP21953 392 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 IDSP22304 550 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 PTPN6P29350 595 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 PNPLA4P41247 253 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 MAP3K8P41279 467 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 PNLIPRP1P54315 467 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 CDKN2DP55273 166 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 ACTBP60709 375 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 RPS20P60866 119 aaKnown RBP4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 ARF6P62330 175 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 ACTG1P63261 375 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 RPP30P78346 268 aaKnown RBP4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 DEFB103AP81534 67 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 H3F3AP84243 136 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 SIGLEC14Q08ET2 396 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 EIF4EBP2Q13542 120 aaPredicted RBP4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 OR4D1Q15615 310 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 IQCJQ1A5X6 159 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 ALG11Q2TAA5 492 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 TMEM95Q3KNT9 176 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 SYT14P1Q58G82 188 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 PYY3Q5JQD4 70 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 ZDHHC20Q5W0Z9 365 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 TRNP1Q6NT89 227 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 CFAP161Q6P656 301 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 BTNL3Q6UXE8 466 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 MBOAT1Q6ZNC8 495 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 LINGO2Q7L985 606 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 FBXO16Q8IX29 292 aaPredicted RBP4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 BAP18Q8IXM2 172 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 C9orf40Q8IXQ3 194 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 GCNT2Q8N0V5 402 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 PGBD5Q8N414 524 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 TMEM105Q8N8V8 129 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 HJURPQ8NCD3 748 aaPredicted RBP4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 OR4F15Q8NGB8 312 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 OR1S2Q8NGQ3 325 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 OR6N1Q8NGY5 312 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 OR4L1Q8NH43 312 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 HUS1BQ8NHY5 278 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 UBA3Q8TBC4 463 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 NEK7Q8TDX7 302 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 TMED6Q8WW62 240 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 SMARCD2Q92925 531 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 PIWIL1Q96J94 861 aaKnown RBP4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 BTF3L4Q96K17 158 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 FAM71F1Q96KD3 344 aaPredicted RBP4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 ABHD1Q96SE0 405 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 NPY6RQ99463 290 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 STACQ99469 402 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 TEAD3Q99594 435 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 PIGQQ9BRB3 760 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 C1QTNF4Q9BXJ3 329 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 SPATC1LQ9H0A9 340 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 TLNRD1Q9H1K6 362 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 ATG5Q9H1Y0 275 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 OR2AG1Q9H205 316 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 IKZF5Q9H5V7 419 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 TMEM185BQ9H7F4 350 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 FKRPQ9H9S5 495 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 NMNAT1Q9HAN9 279 aaPredicted RBP4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 TPT1P8Q9HAU6 139 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 RHOFQ9HBH0 211 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 TMEM27Q9HBJ8 222 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 HRASLSQ9HDD0 168 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 RPS10P5Q9NQ39 176 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 PARP11Q9NR21 331 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 TLR8Q9NR97 1041 aaKnown RBP4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 TMEM161AQ9NX61 479 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 ELOVL2Q9NXB9 296 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 TRPC4Q9UBN4 977 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 GIMAP2Q9UG22 337 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 ERRFI1Q9UJM3 462 aaPredicted RBP4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 RASD1Q9Y272 281 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 ADAM18Q9Y3Q7 739 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 RAI2Q9Y5P3 530 aa4.06□□□□□ -1.76
PDLIM5-211ENST00000508531 MIA3Q5JRA6 1907 aa4.05□□□□□ -1.76
PDLIM5-211ENST00000508531 KMT2EQ8IZD2 1858 aa4.05□□□□□ -1.76
PDLIM5-211ENST00000508531 UNC79Q9P2D8 2635 aa4.05□□□□□ -1.76
PDLIM5-211ENST00000508531 TEX13DA0A0J9YY54 714 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms