RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 HSPB11Q9Y547 144 aa6.54□□□□□ -1.36
PDGFRA-206ENST00000508170 SIRT4Q9Y6E7 314 aaPredicted RBP6.54□□□□□ -1.36
PDGFRA-206ENST00000508170 UBE2QL1A1L167 161 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 CDC14CA4D256 554 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 ZNF878C9JN71 531 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 LOC110117498-PIK3R3F6TDL0 507 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 F8W735 103 aaPredicted RBP6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 GPR31O00270 319 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 PHF1O43189 567 aaPredicted RBP6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 CDC14BO60729 498 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 CATP04040 527 aaKnown RBP6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 HTR1AP08908 422 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 IFI30P13284 250 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 ALOX5APP20292 161 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 GATA3P23771 443 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 TAS2R31P59538 309 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 PSMD5Q16401 504 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 C14orf28Q4W4Y0 310 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 C9orf64Q5T6V5 341 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 OR4A47Q6IF82 309 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 ZNF585AQ6P3V2 769 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 SPNS3Q6ZMD2 512 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 Q6ZS46 218 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 CYB5R4Q7L1T6 521 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 MRPL52Q86TS9 123 aaKnown RBP6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 NIT1Q86X76 327 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 PRSS35Q8N3Z0 413 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 ST6GALNAC3Q8NDV1 305 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 ACVR1CQ8NER5 493 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 OR5K2Q8NHB8 316 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 GRPEL2Q8TAA5 225 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 PCED1BQ96HM7 432 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 ADTRPQ96IZ2 230 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 ZNF599Q96NL3 588 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 VPS25Q9BRG1 176 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 NIPAL2Q9H841 368 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 ZBTB20Q9HC78 741 aaPredicted RBP6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 MCUBQ9NWR8 336 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 B3GNT2Q9NY97 397 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 ELF5Q9UKW6 265 aaPredicted RBP6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 KCPQ6ZWJ8 1503 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 MROH7Q68CQ1 1323 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 ANKRD20A5PA0PJZ0 165 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 OR2B3O76000 313 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 MT-CO2P00403 227 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 OR3A2P47893 321 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 GSK3BP49841 420 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 PAX9P55771 341 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 RPL31P62899 125 aaKnown RBP6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 NTHL1P78549 312 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 MFGE8Q08431 387 aaPredicted RBP6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 CD300CQ08708 224 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 ABRAXAS2Q15018 415 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 FRG2Q64ET8 278 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 RDH11Q8TC12 318 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 MAPK15Q8TD08 544 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 ZHX1-C8orf76Q96EF9 292 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 C20orf173Q96LM9 149 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 ARHGDIGQ99819 225 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 B3GAT2Q9NPZ5 323 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 BIN3Q9NQY0 253 aa6.53□□□□□ -1.36
PDGFRA-206ENST00000508170 WDR17Q8IZU2 1322 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 CENPVL1A0A0U1RR11 272 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 CENPVL3A0A0U1RRI6 287 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 PHYHO14832 338 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 RAD51CO43502 376 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 CRYAAP02489 173 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 IFNA4P05014 189 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 S100A8P05109 93 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 NELFEP18615 380 aaKnown RBP6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 OMGP23515 440 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 FPR3P25089 353 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 PIGAP37287 484 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 XCR1P46094 333 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 ZNF121P58317 390 aaPredicted RBP6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 DNAJB13P59910 316 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 ISL1P61371 349 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 GNG3P63215 75 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 PAFAH1B2P68402 229 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 BTN3A2P78410 334 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 HGFACQ04756 655 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 TRAM1Q15629 374 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 SIRPB2Q5JXA9 342 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 SLC27A4Q6P1M0 643 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 LEG1Q6P5S2 330 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 RAD9BQ6WBX8 426 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 DHRSXQ8N5I4 330 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 LINC00301Q8NCQ3 95 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 OR4D9Q8NGE8 314 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 OR1S2Q8NGQ3 325 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 OR1K1Q8NGR3 316 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 OR1P1Q8NH06 330 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 GPR148Q8TDV2 347 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 RNF128Q8TEB7 428 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 NDRG1Q92597 394 aaKnown RBP6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 MED8Q96G25 268 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 CPXM1Q96SM3 734 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 MRIQ9BWK5 157 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 TMEM74BQ9NUR3 256 aa6.52□□□□□ -1.37
PDGFRA-206ENST00000508170 TESQ9UGI8 421 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms