RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 SRP9P49458 86 aaKnown RBP4.79□□□□□ -1.64
GYPB-208ENST00000507009 PROK1P58294 105 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 MTPNP58546 118 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 TAS2R41P59536 307 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 PCBD1P61457 104 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 GUCY1A3Q02108 690 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 PAX2Q02962 417 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 PRB3Q04118 309 aaPredicted RBP4.79□□□□□ -1.64
GYPB-208ENST00000507009 EGR3Q06889 387 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 ENDOGQ14249 297 aaKnown RBP4.79□□□□□ -1.64
GYPB-208ENST00000507009 NRN1LQ496H8 165 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 AGKQ53H12 422 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 C10orf128Q5T292 105 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 ARMC4Q5T2S8 1044 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 WDR25Q64LD2 544 aaPredicted RBP4.79□□□□□ -1.64
GYPB-208ENST00000507009 SLC25A47Q6Q0C1 308 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 Q6ZPA2 131 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 MAVSQ7Z434 540 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 NKAIN4Q8IVV8 208 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 FITM2Q8N6M3 262 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 C11orf65Q8NCR3 313 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 SSMEM1Q8WWF3 244 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 GATAD2BQ8WXI9 593 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 UTP4Q969X6 686 aaKnown RBP4.79□□□□□ -1.64
GYPB-208ENST00000507009 SPDL1Q96EA4 605 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 FAM71F1Q96KD3 344 aaPredicted RBP4.79□□□□□ -1.64
GYPB-208ENST00000507009 MAGEB18Q96M61 343 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 RBP7Q96R05 134 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 CPPED1Q9BRF8 314 aaPredicted RBP4.79□□□□□ -1.64
GYPB-208ENST00000507009 TRIM15Q9C019 465 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 SEMA6AQ9H2E6 1030 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 TOR3AQ9H497 397 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 C20orf141Q9NUB4 165 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 UFSP2Q9NUQ7 469 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 ACOXLQ9NUZ1 547 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 THAP1Q9NVV9 213 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.79□□□□□ -1.64
GYPB-208ENST00000507009 NDRG4Q9ULP0 352 aaKnown RBP4.79□□□□□ -1.64
GYPB-208ENST00000507009 TMCC3Q9ULS5 477 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 V9GYY5 206 aaPredicted RBP4.79□□□□□ -1.64
GYPB-208ENST00000507009 DOCK11Q5JSL3 2073 aa4.79□□□□□ -1.64
GYPB-208ENST00000507009 IGHV1-69DA0A0B4J2H0 117 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 CENPVL3A0A0U1RRI6 287 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 ZNF816-ZNF321PA0A0X1KG74 233 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 GMNCA6NCL1 334 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 BTBD17A6NE02 478 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 ZNF879B4DU55 563 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 IFNL4K9M1U5 179 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 P2RY10O00398 339 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 FBP2O00757 339 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 POLR3GO15318 223 aaPredicted RBP4.78□□□□□ -1.64
GYPB-208ENST00000507009 IGHV1-69P01742 117 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 MT-ND1P03886 318 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 HLA-DPB1P04440 258 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 VIMP08670 466 aaKnown RBP4.78□□□□□ -1.64
GYPB-208ENST00000507009 DBHP09172 617 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 PPIAL4GP0DN37 164 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 KITLGP21583 273 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 CFHR2P36980 270 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 CENPAP49450 140 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 CTXN1P60606 82 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 RPL27P61353 136 aaKnown RBP4.78□□□□□ -1.64
GYPB-208ENST00000507009 ARF6P62330 175 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 SELPLGQ14242 412 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 BEAN1Q3B7T3 259 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 ZNF404Q494X3 552 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 ALG10Q5BKT4 473 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 LRIF1Q5T3J3 769 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 FAM27BQ5VT28 67 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 METTL11BQ5VVY1 283 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 PRAMEF6Q5VXH4 476 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 FAM205BPQ63HN1 556 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 SFRP4Q6FHJ7 346 aaPredicted RBP4.78□□□□□ -1.64
GYPB-208ENST00000507009 DHRS7BQ6IAN0 325 aaPredicted RBP4.78□□□□□ -1.64
GYPB-208ENST00000507009 Q6ZSV7 163 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 PTOV1Q86YD1 416 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 FUNDC1Q8IVP5 155 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 C1orf87Q8N0U7 546 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 LYG1Q8N1E2 194 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 OR51A7Q8NH64 312 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 AENQ8WTP8 325 aaKnown RBP4.78□□□□□ -1.64
GYPB-208ENST00000507009 TMEM239Q8WW34 195 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.78□□□□□ -1.64
GYPB-208ENST00000507009 SGCDQ92629 289 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 DYRK2Q92630 601 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 PTP4A1Q93096 173 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 HAVCR1Q96D42 359 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 MPP4Q96JB8 637 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 MAELQ96JY0 434 aaKnown RBP4.78□□□□□ -1.64
GYPB-208ENST00000507009 ZNF582Q96NG8 517 aaPredicted RBP4.78□□□□□ -1.64
GYPB-208ENST00000507009 WDFY2Q96P53 400 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 TBX15Q96SF7 602 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 PRSS27Q9BQR3 290 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 TXNIPQ9H3M7 391 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 TMEM38AQ9H6F2 299 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 EVA1AQ9H8M9 152 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 SMURF2Q9HAU4 748 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 SSU72Q9NP77 194 aaKnown RBP4.78□□□□□ -1.64
GYPB-208ENST00000507009 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.78□□□□□ -1.64
GYPB-208ENST00000507009 POLE4Q9NR33 117 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms