RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 C16orf89Q6UX73 402 aa12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 C12orf54Q6X4T0 127 aa12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 THSD4Q6ZMP0 1018 aa12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 HIST2H3AQ71DI3 136 aa12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 SEMA6DQ8NFY4 1073 aa12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 FANK1Q8TC84 345 aa12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 ZNF582Q96NG8 517 aaPredicted RBP12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 ERMAPQ96PL5 475 aaPredicted RBP12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 FUZQ9BT04 418 aa12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 HCAR1Q9BXC0 346 aa12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 TMPRSS13Q9BYE2 586 aa12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 OR52D1Q9H346 318 aa12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 C7orf69Q9H7B7 122 aa12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 NTN4Q9HB63 628 aa12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 UBAP1Q9NZ09 502 aa12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 POLR3KQ9Y2Y1 108 aaPredicted RBP12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 STARD10Q9Y365 291 aa12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 CACNG2Q9Y698 323 aa12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 CUBNO60494 3623 aa12.19□□□□□ -0.46
HMGCS1-203ENST00000507004 OR10H3O60404 316 aa12.19□□□□□ -0.46
HMGCS1-203ENST00000507004 DCTN3O75935 186 aa12.19□□□□□ -0.46
HMGCS1-203ENST00000507004 IGHV2-70P01814 119 aa12.19□□□□□ -0.46
HMGCS1-203ENST00000507004 MDH2P40926 338 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-203ENST00000507004 CDKN2AP42771 156 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-203ENST00000507004 CENPAP49450 140 aa12.19□□□□□ -0.46
HMGCS1-203ENST00000507004 BTG1P62324 171 aa12.19□□□□□ -0.46
HMGCS1-203ENST00000507004 CCDC92Q53HC0 331 aaPredicted RBP12.19□□□□□ -0.46
HMGCS1-203ENST00000507004 TMEM255AQ5JRV8 349 aa12.19□□□□□ -0.46
HMGCS1-203ENST00000507004 LRRC28Q86X40 367 aaPredicted RBP12.19□□□□□ -0.46
HMGCS1-203ENST00000507004 C1orf87Q8N0U7 546 aa12.19□□□□□ -0.46
HMGCS1-203ENST00000507004 BPIFB2Q8N4F0 458 aa12.19□□□□□ -0.46
HMGCS1-203ENST00000507004 OR8G5Q8NG78 346 aa12.19□□□□□ -0.46
HMGCS1-203ENST00000507004 OR2AJ1Q8NGZ0 328 aa12.19□□□□□ -0.46
HMGCS1-203ENST00000507004 OR52J3Q8NH60 311 aa12.19□□□□□ -0.46
HMGCS1-203ENST00000507004 GNPDA2Q8TDQ7 276 aa12.19□□□□□ -0.46
HMGCS1-203ENST00000507004 FAM216AQ8WUB2 273 aa12.19□□□□□ -0.46
HMGCS1-203ENST00000507004 CDADC1Q9BWV3 514 aa12.19□□□□□ -0.46
HMGCS1-203ENST00000507004 PATZ1Q9HBE1 687 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-203ENST00000507004 IL1RAPQ9NPH3 570 aa12.19□□□□□ -0.46
HMGCS1-203ENST00000507004 TAGLN3Q9UI15 199 aa12.19□□□□□ -0.46
HMGCS1-203ENST00000507004 B9D1Q9UPM9 204 aa12.19□□□□□ -0.46
HMGCS1-203ENST00000507004 TANC2Q9HCD6 1990 aa12.19□□□□□ -0.46
HMGCS1-203ENST00000507004 IGLV1-36A0A0B4J1U3 117 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 LRRC30A6NM36 301 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 A8MXK9 166 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 RER1O15258 196 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 PPP1R3DO95685 299 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 SEMG1P04279 462 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 SBK2P0C263 348 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 ADRA2CP18825 462 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 FXYD6P3P58550 94 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 TSPAN31Q12999 210 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 MALLQ13021 153 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 SEC23BQ15437 767 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 ZNF181Q2M3W8 571 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 C1orf94Q6P1W5 598 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 LEG1Q6P5S2 330 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 PTCHD4Q6ZW05 846 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 ZBTB46Q86UZ6 589 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 ATG16L2Q8NAA4 619 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 OR52L1Q8NGH7 329 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 ERGIC1Q969X5 290 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 ZMYND19Q96E35 227 aaPredicted RBP12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 OR2V2Q96R30 315 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 IFT27Q9BW83 186 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 SLC22A4Q9H015 551 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 FAM107BQ9H098 131 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 LRCH1Q9Y2L9 728 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 ARL2BPQ9Y2Y0 163 aa12.18□□□□□ -0.46
HMGCS1-203ENST00000507004 LOC105371242A0A075B767 164 aa12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 IQCF6A8MYZ5 107 aa12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 DIRAS1O95057 198 aa12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 VENTXO95231 258 aa12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 GSSP48637 474 aa12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 COMPP49747 757 aaPredicted RBP12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 ACTG1P63261 375 aa12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 SRSF2Q01130 221 aaKnown RBP12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 ESCO2Q56NI9 601 aa12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 RBMS3Q6XE24 437 aaKnown RBP12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 COLCA1Q6ZS62 124 aa12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 ARHGAP24Q8N264 748 aa12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 RNF148Q8N7C7 305 aa12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 CELF2-AS1Q8N7Q2 184 aa12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 SLC26A10Q8NG04 563 aa12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 OR4C15Q8NGM1 316 aa12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 ITLN1Q8WWA0 313 aa12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 CDRT15Q96T59 188 aa12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 GPA33Q99795 319 aa12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 MRI1Q9BV20 369 aa12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 C1QTNF5Q9BXJ0 243 aa12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 MUC13Q9H3R2 512 aa12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 ZMAT3Q9HA38 289 aaKnown RBP12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 SRA1Q9HD15 236 aaKnown RBP12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 OR5V1Q9UGF6 321 aa12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 CD300AQ9UGN4 299 aa12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 IL20RAQ9UHF4 553 aa12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 LHFPL6Q9Y693 200 aa12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 DYSFO75923 2080 aa12.17□□□□□ -0.46
HMGCS1-203ENST00000507004 TMEM178BH3BS89 294 aa12.16□□□□□ -0.46
HMGCS1-203ENST00000507004 ARPC2O15144 300 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms