RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 KLF3P57682 345 aaPredicted RBP17.06■□□□□ 0.32
SNX25-204ENST00000506896 MOGQ16653 247 aa17.06■□□□□ 0.32
SNX25-204ENST00000506896 ZNF718Q3SXZ3 478 aa17.06■□□□□ 0.32
SNX25-204ENST00000506896 KLHL12Q53G59 568 aa17.06■□□□□ 0.32
SNX25-204ENST00000506896 C12orf73Q69YU5 71 aa17.06■□□□□ 0.32
SNX25-204ENST00000506896 ABHD4Q8TB40 342 aa17.06■□□□□ 0.32
SNX25-204ENST00000506896 SYNPRQ8TBG9 265 aa17.06■□□□□ 0.32
SNX25-204ENST00000506896 COX4I2Q96KJ9 171 aa17.06■□□□□ 0.32
SNX25-204ENST00000506896 INTS14Q96SY0 518 aa17.06■□□□□ 0.32
SNX25-204ENST00000506896 SMR3AQ99954 134 aa17.06■□□□□ 0.32
SNX25-204ENST00000506896 RIBC2Q9H4K1 309 aa17.06■□□□□ 0.32
SNX25-204ENST00000506896 DYNLRB1Q9NP97 96 aa17.06■□□□□ 0.32
SNX25-204ENST00000506896 SLCO1C1Q9NYB5 712 aa17.06■□□□□ 0.32
SNX25-204ENST00000506896 DUSP13Q9UII6 198 aa17.06■□□□□ 0.32
SNX25-204ENST00000506896 GRIP1Q9Y3R0 1128 aa17.06■□□□□ 0.32
SNX25-204ENST00000506896 ARFGEF3Q5TH69 2177 aa17.06■□□□□ 0.32
SNX25-204ENST00000506896 BAG2O95816 211 aa17.05■□□□□ 0.32
SNX25-204ENST00000506896 IGHV4-39P01824 125 aa17.05■□□□□ 0.32
SNX25-204ENST00000506896 EPHA2P29317 976 aa17.05■□□□□ 0.32
SNX25-204ENST00000506896 GCH1P30793 250 aa17.05■□□□□ 0.32
SNX25-204ENST00000506896 PPP1CBP62140 327 aa17.05■□□□□ 0.32
SNX25-204ENST00000506896 MSMPQ1L6U9 139 aa17.05■□□□□ 0.32
SNX25-204ENST00000506896 LYPD4Q6UWN0 246 aa17.05■□□□□ 0.32
SNX25-204ENST00000506896 RFPL4BQ6ZWI9 263 aa17.05■□□□□ 0.32
SNX25-204ENST00000506896 SHFQ7M4L6 423 aa17.05■□□□□ 0.32
SNX25-204ENST00000506896 CBR4Q8N4T8 237 aa17.05■□□□□ 0.32
SNX25-204ENST00000506896 MAP6Q96JE9 813 aa17.05■□□□□ 0.32
SNX25-204ENST00000506896 SYT3Q9BQG1 590 aa17.05■□□□□ 0.32
SNX25-204ENST00000506896 RAB1BQ9H0U4 201 aa17.05■□□□□ 0.32
SNX25-204ENST00000506896 MS4A5Q9H3V2 200 aa17.05■□□□□ 0.32
SNX25-204ENST00000506896 PNRC2Q9NPJ4 139 aaKnown RBP17.05■□□□□ 0.32
SNX25-204ENST00000506896 FZR1Q9UM11 496 aa17.05■□□□□ 0.32
SNX25-204ENST00000506896 IGLV3-9A0A075B6K5 115 aa17.04■□□□□ 0.32
SNX25-204ENST00000506896 A0A1W2PPW3 197 aa17.04■□□□□ 0.32
SNX25-204ENST00000506896 TRIM64A6NGJ6 449 aa17.04■□□□□ 0.32
SNX25-204ENST00000506896 TRIM64BA6NI03 449 aa17.04■□□□□ 0.32
SNX25-204ENST00000506896 H7C1Q1 480 aa17.04■□□□□ 0.32
SNX25-204ENST00000506896 NGFP01138 241 aa17.04■□□□□ 0.32
SNX25-204ENST00000506896 SLC2A5P22732 501 aa17.04■□□□□ 0.32
SNX25-204ENST00000506896 EFNA4P52798 201 aa17.04■□□□□ 0.32
SNX25-204ENST00000506896 ERVS71-1P61550 626 aa17.04■□□□□ 0.32
SNX25-204ENST00000506896 RPS7P62081 194 aaKnown RBP17.04■□□□□ 0.32
SNX25-204ENST00000506896 EFNB1P98172 346 aa17.04■□□□□ 0.32
SNX25-204ENST00000506896 KRTAP27-1Q3LI81 207 aa17.04■□□□□ 0.32
SNX25-204ENST00000506896 LCN1P1Q5VSP4 162 aa17.04■□□□□ 0.32
SNX25-204ENST00000506896 MBNL2Q5VZF2 373 aaKnown RBP17.04■□□□□ 0.32
SNX25-204ENST00000506896 TMEM154Q6P9G4 183 aa17.04■□□□□ 0.32
SNX25-204ENST00000506896 DCXRQ7Z4W1 244 aa17.04■□□□□ 0.32
SNX25-204ENST00000506896 ERI1Q8IV48 349 aaKnown RBP17.04■□□□□ 0.32
SNX25-204ENST00000506896 SLC25A40Q8TBP6 338 aa17.04■□□□□ 0.32
SNX25-204ENST00000506896 TMEM163Q8TC26 289 aa17.04■□□□□ 0.32
SNX25-204ENST00000506896 SLC7A6Q92536 515 aa17.04■□□□□ 0.32
SNX25-204ENST00000506896 SPTSSAQ969W0 71 aa17.04■□□□□ 0.32
SNX25-204ENST00000506896 EME1Q96AY2 570 aa17.04■□□□□ 0.32
SNX25-204ENST00000506896 MARS2Q96GW9 593 aaKnown RBP17.04■□□□□ 0.32
SNX25-204ENST00000506896 VRK1Q99986 396 aaPredicted RBP17.04■□□□□ 0.32
SNX25-204ENST00000506896 DDX28Q9NUL7 540 aaKnown RBP17.04■□□□□ 0.32
SNX25-204ENST00000506896 CSPG4Q6UVK1 2322 aa17.04■□□□□ 0.32
SNX25-204ENST00000506896 TLN2Q9Y4G6 2542 aa17.03■□□□□ 0.32
SNX25-204ENST00000506896 NSD1Q96L73 2696 aaPredicted RBP17.03■□□□□ 0.32
SNX25-204ENST00000506896 TLX2O43763 284 aaPredicted RBP17.03■□□□□ 0.32
SNX25-204ENST00000506896 PRKYO43930 277 aa17.03■□□□□ 0.32
SNX25-204ENST00000506896 NDUFS7O75251 213 aa17.03■□□□□ 0.32
SNX25-204ENST00000506896 F12P00748 615 aaPredicted RBP17.03■□□□□ 0.32
SNX25-204ENST00000506896 IGHV3-13P01766 116 aa17.03■□□□□ 0.32
SNX25-204ENST00000506896 MT-ND5P03915 603 aa17.03■□□□□ 0.32
SNX25-204ENST00000506896 RPS27P42677 84 aaKnown RBP17.03■□□□□ 0.32
SNX25-204ENST00000506896 NUDT6P53370 316 aa17.03■□□□□ 0.32
SNX25-204ENST00000506896 APOFQ13790 326 aa17.03■□□□□ 0.32
SNX25-204ENST00000506896 DNM1P46Q6ZS02 220 aa17.03■□□□□ 0.32
SNX25-204ENST00000506896 ZBTB49Q6ZSB9 765 aa17.03■□□□□ 0.32
SNX25-204ENST00000506896 RHOUQ7L0Q8 258 aa17.03■□□□□ 0.32
SNX25-204ENST00000506896 LRP11Q86VZ4 500 aa17.03■□□□□ 0.32
SNX25-204ENST00000506896 TIGD4Q8IY51 512 aa17.03■□□□□ 0.32
SNX25-204ENST00000506896 ZNF454Q8N9F8 522 aa17.03■□□□□ 0.32
SNX25-204ENST00000506896 OR5L1Q8NGL2 311 aa17.03■□□□□ 0.32
SNX25-204ENST00000506896 OR6N2Q8NGY6 317 aa17.03■□□□□ 0.32
SNX25-204ENST00000506896 KLF14Q8TD94 323 aaPredicted RBP17.03■□□□□ 0.32
SNX25-204ENST00000506896 APOBEC3DQ96AK3 386 aaPredicted RBP17.03■□□□□ 0.32
SNX25-204ENST00000506896 ZMYND19Q96E35 227 aaPredicted RBP17.03■□□□□ 0.32
SNX25-204ENST00000506896 OR2J1Q9GZK6 312 aa17.03■□□□□ 0.32
SNX25-204ENST00000506896 H2AFY2Q9P0M6 372 aaPredicted RBP17.03■□□□□ 0.32
SNX25-204ENST00000506896 ADRA2AP08913 450 aa17.02■□□□□ 0.32
SNX25-204ENST00000506896 DBHP09172 617 aa17.02■□□□□ 0.32
SNX25-204ENST00000506896 POLR2IP36954 125 aaKnown RBP17.02■□□□□ 0.32
SNX25-204ENST00000506896 TPTEP56180 551 aa17.02■□□□□ 0.32
SNX25-204ENST00000506896 DSCR9P59020 149 aa17.02■□□□□ 0.32
SNX25-204ENST00000506896 CDC42P60953 191 aa17.02■□□□□ 0.32
SNX25-204ENST00000506896 EIF2B1Q14232 305 aaKnown RBP17.02■□□□□ 0.32
SNX25-204ENST00000506896 NKPD1Q17RQ9 610 aa17.02■□□□□ 0.32
SNX25-204ENST00000506896 CLEC12BQ2HXU8 276 aa17.02■□□□□ 0.32
SNX25-204ENST00000506896 SPATA46Q5T0L3 261 aa17.02■□□□□ 0.32
SNX25-204ENST00000506896 NXNL2Q5VZ03 156 aa17.02■□□□□ 0.32
SNX25-204ENST00000506896 DPY19L4Q7Z388 723 aa17.02■□□□□ 0.32
SNX25-204ENST00000506896 TCEANCQ8N8B7 351 aa17.02■□□□□ 0.32
SNX25-204ENST00000506896 BBS1Q8NFJ9 593 aa17.02■□□□□ 0.32
SNX25-204ENST00000506896 ST7LQ8TDW4 575 aa17.02■□□□□ 0.32
SNX25-204ENST00000506896 SNX33Q8WV41 574 aa17.02■□□□□ 0.32
SNX25-204ENST00000506896 NEU4Q8WWR8 484 aaPredicted RBP17.02■□□□□ 0.32
SNX25-204ENST00000506896 SORCS2Q96PQ0 1159 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms