RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 PRKACGP22612 351 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 LOXP28300 417 aaPredicted RBP3.95□□□□□ -1.78
CLDND1-212ENST00000506885 GNRHRP30968 328 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 BTDP43251 543 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 CYCSP99999 105 aaKnown RBP3.95□□□□□ -1.78
CLDND1-212ENST00000506885 FKBP3Q00688 224 aaKnown RBP3.95□□□□□ -1.78
CLDND1-212ENST00000506885 HMGCS1Q01581 520 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 ZNF92Q03936 586 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 ASAH1Q13510 395 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 RAB31Q13636 194 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 CAPRIN1Q14444 709 aaKnown RBP3.95□□□□□ -1.78
CLDND1-212ENST00000506885 KRTAP5-4Q6L8H1 288 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 UFSP1Q6NVU6 142 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 PRSS57Q6UWY2 283 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 C12orf54Q6X4T0 127 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 Q6ZRP5 223 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 Q6ZT83 130 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 MRPL52Q86TS9 123 aaKnown RBP3.95□□□□□ -1.78
CLDND1-212ENST00000506885 HIPK1Q86Z02 1210 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 ENTHD1Q8IYW4 607 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 RDH10Q8IZV5 341 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 CA13Q8N1Q1 262 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 C2orf73Q8N5S3 287 aaPredicted RBP3.95□□□□□ -1.78
CLDND1-212ENST00000506885 ERMNQ8TAM6 284 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 SFXN5Q8TD22 340 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 MCOLN3Q8TDD5 553 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 DOK4Q8TEW6 326 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 FRAT1Q92837 279 aaPredicted RBP3.95□□□□□ -1.78
CLDND1-212ENST00000506885 S100PBPQ96BU1 408 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 SLC25A38Q96DW6 304 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 MED8Q96G25 268 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 PGLYRP4Q96LB8 373 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 TSNAXQ99598 290 aaKnown RBP3.95□□□□□ -1.78
CLDND1-212ENST00000506885 GPR21Q99679 349 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 AMBNQ9NP70 447 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 TIGARQ9NQ88 270 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 FKBP14Q9NWM8 211 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 TAS2R9Q9NYW1 312 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 PRODH2Q9UF12 536 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 CLEC4EQ9ULY5 219 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 TFR2Q9UP52 801 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 ZNF256Q9Y2P7 627 aaPredicted RBP3.95□□□□□ -1.78
CLDND1-212ENST00000506885 ACOT9Q9Y305 439 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 MAGI3Q5TCQ9 1506 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 POGZQ7Z3K3 1410 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 UACAQ9BZF9 1416 aa3.95□□□□□ -1.78
CLDND1-212ENST00000506885 FER1L5A0AVI2 2057 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 IQSEC2Q5JU85 1478 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 WDR7Q9Y4E6 1490 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 ANKRD30BQ9BXX2 1392 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 A0A0B4J2E0 115 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 A0A1B0GX12 115 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 FOXI3A8MTJ6 420 aaPredicted RBP3.94□□□□□ -1.78
CLDND1-212ENST00000506885 GABRPO00591 440 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 SLC17A2O00624 439 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 SLC31A1O15431 190 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 NUPL2O15504 423 aaKnown RBP3.94□□□□□ -1.78
CLDND1-212ENST00000506885 CYTH3O43739 400 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 CDC40O60508 579 aaKnown RBP eCLIP3.94□□□□□ -1.78
CLDND1-212ENST00000506885 LYPLA2O95372 231 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 IFNA5P01569 189 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 HCKP08631 526 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 HSPD1P10809 573 aaKnown RBP3.94□□□□□ -1.78
CLDND1-212ENST00000506885 FOLR1P15328 257 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 RAB5AP20339 215 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 GCKP35557 465 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 RORCP51449 518 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 NKX2-5P52952 324 aaPredicted RBP3.94□□□□□ -1.78
CLDND1-212ENST00000506885 NUP107P57740 925 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 NANOS2P60321 138 aaKnown RBP3.94□□□□□ -1.78
CLDND1-212ENST00000506885 POLR2GP62487 172 aaKnown RBP eCLIP3.94□□□□□ -1.78
CLDND1-212ENST00000506885 TGFBR3Q03167 851 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 STX4Q12846 297 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 PDIA2Q13087 525 aaKnown RBP3.94□□□□□ -1.78
CLDND1-212ENST00000506885 OR7A5Q15622 319 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 TMEM249Q2WGJ8 235 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 KLF17Q5JT82 389 aaPredicted RBP3.94□□□□□ -1.78
CLDND1-212ENST00000506885 RUSC1-AS1Q66K80 236 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 SLC35E4Q6ICL7 350 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 NIPAL1Q6NVV3 410 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 DRAM2Q6UX65 266 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 FAM19A1Q7Z5A9 133 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 NAXDQ8IW45 347 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 FBXO16Q8IX29 292 aaPredicted RBP3.94□□□□□ -1.78
CLDND1-212ENST00000506885 C9orf40Q8IXQ3 194 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 Q8N402 240 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 ARRDC1Q8N5I2 433 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 RFLNBQ8N5W9 214 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 OR5AR1Q8NGP9 310 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 OR2A1Q8NGT9 310 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 OR10R2Q8NGX6 335 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 SSC4DQ8WTU2 575 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 ARPC1AQ92747 370 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 TMEM54Q969K7 222 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 RCN3Q96D15 328 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 YIPF6Q96EC8 236 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 CLEC7AQ9BXN2 247 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 SRXN1Q9BYN0 137 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 CENPHQ9H3R5 247 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 EXD2Q9NVH0 621 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms